Gene annotation
Transcriptome id Sobic.003G227300.1
Synonym Sb03g028530, WRKY71, ATWRKY71
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
WRKY11, expressed
UniProt C5XED4
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G18170 : WRKY DNA-binding protein 28
RAP-DB (Rice) LOC_Os01g43650.2 : WRKY11, expressed
MaizeGDB (Corn) Zm00025a028341 , Zm00025a038604
Brachypodium KQK08818 , KQK08819
Barley HORVU4Hr1G048400.8 , HORVU4Hr1G048400.9 , HORVU4Hr1G048400.2 , HORVU4Hr1G048400.3 , HORVU4Hr1G048400.1 , HORVU4Hr1G048400.6 , HORVU4Hr1G048400.7 , HORVU4Hr1G048400.4 , HORVU4Hr1G048400.5 , HORVU4Hr1G048400.12 , HORVU4Hr1G048400.10 , HORVU4Hr1G048400.11
Wheat TraesCS3D02G226300 , TraesCS3B02G256000 , TraesCS3A02G228600
Populus -


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cDNA sequences
Sobic.003G227300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
3 Sobic.001G025300 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.007G145600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
5 Sobic.001G339700 expressed protein -
6 Sobic.004G071650 - -
7 Sobic.001G331301 - -
8 Sobic.009G120000 - -
9 Sobic.005G045900 - -
10 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.003G152100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed -
13 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
14 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G320400 lysM domain containing protein, putative, expressed -
17 Sobic.001G474200 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
18 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -


Gene co-expression network
sample Sobic003G227300 Sobic003G227300 Sobic001G119100 Sobic001G119100 Sobic003G227300--Sobic001G119100 Sobic002G183200 Sobic002G183200 Sobic003G227300--Sobic002G183200 Sobic001G025300 Sobic001G025300 Sobic003G227300--Sobic001G025300 Sobic007G145600 Sobic007G145600 Sobic003G227300--Sobic007G145600 Sobic001G339700 Sobic001G339700 Sobic003G227300--Sobic001G339700 Sobic004G071650 Sobic004G071650 Sobic003G227300--Sobic004G071650 Sobic001G331301 Sobic001G331301 Sobic003G227300--Sobic001G331301 Sobic009G120000 Sobic009G120000 Sobic003G227300--Sobic009G120000 Sobic005G045900 Sobic005G045900 Sobic003G227300--Sobic005G045900 Sobic001G119000 Sobic001G119000 Sobic001G119100--Sobic001G119000 Sobic001G119100--Sobic002G183200 Sobic001G119100--Sobic003G227300 Sobic001G119100--Sobic007G145600 Sobic005G091500 Sobic005G091500 Sobic001G119100--Sobic005G091500 Sobic004G189400 Sobic004G189400 Sobic001G119100--Sobic004G189400 Sobic010G084400 Sobic010G084400 Sobic001G119100--Sobic010G084400 Sobic007G061300 Sobic007G061300 Sobic001G119100--Sobic007G061300 Sobic001G119100--Sobic001G339700 Sobic003G286600 Sobic003G286600 Sobic002G183200--Sobic003G286600 Sobic002G183200--Sobic005G091500 Sobic002G183200--Sobic004G189400 Sobic002G183200--Sobic001G025300 Sobic002G183200--Sobic001G119100 Sobic010G176600 Sobic010G176600 Sobic002G183200--Sobic010G176600 Sobic006G099900 Sobic006G099900 Sobic002G183200--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic002G183200--Sobic001G317200 Sobic002G183200--Sobic010G084400 Sobic001G025101 Sobic001G025101 Sobic001G025300--Sobic001G025101 Sobic002G416600 Sobic002G416600 Sobic001G025300--Sobic002G416600 Sobic001G025300--Sobic002G183200 Sobic001G025300--Sobic003G286600 Sobic005G051200 Sobic005G051200 Sobic001G025300--Sobic005G051200 Sobic001G025300--Sobic001G317200 Sobic004G166700 Sobic004G166700 Sobic001G025300--Sobic004G166700 Sobic001G025300--Sobic006G099900 Sobic001G070800 Sobic001G070800 Sobic001G025300--Sobic001G070800 Sobic007G145600--Sobic001G317200 Sobic010G239300 Sobic010G239300 Sobic007G145600--Sobic010G239300 Sobic007G145600--Sobic001G339700 Sobic007G145600--Sobic001G119100 Sobic002G104900 Sobic002G104900 Sobic007G145600--Sobic002G104900 Sobic007G145600--Sobic010G084400 Sobic010G178500 Sobic010G178500 Sobic007G145600--Sobic010G178500 Sobic001G252300 Sobic001G252300 Sobic007G145600--Sobic001G252300 Sobic003G252800 Sobic003G252800 Sobic007G145600--Sobic003G252800 Sobic001G533400 Sobic001G533400 Sobic001G339700--Sobic001G533400 Sobic001G339700--Sobic001G317200 Sobic001G339700--Sobic007G145600 Sobic001G339700--Sobic010G084400 Sobic001G339700--Sobic003G252800 Sobic001G339700--Sobic006G099900 Sobic008G025600 Sobic008G025600 Sobic001G339700--Sobic008G025600 Sobic005G101800 Sobic005G101800 Sobic001G339700--Sobic005G101800 Sobic005G084600 Sobic005G084600 Sobic001G339700--Sobic005G084600 Sobic010G084100 Sobic010G084100 Sobic004G071650--Sobic010G084100 Sobic010G084700 Sobic010G084700 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic004G071650--Sobic005G045900 Sobic004G071650--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic004G071650--Sobic001G348700 Sobic004G221500 Sobic004G221500 Sobic004G071650--Sobic004G221500 Sobic005G206601 Sobic005G206601 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic004G128400 Sobic004G128400 Sobic001G331301--Sobic004G128400 Sobic001G331301--Sobic003G227300 Sobic001G335600 Sobic001G335600 Sobic001G331301--Sobic001G335600 Sobic004G111800 Sobic004G111800 Sobic001G331301--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic001G331301--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G331301--Sobic001G243500 Sobic009G106800 Sobic009G106800 Sobic001G331301--Sobic009G106800 Sobic001G331301--Sobic005G206601 Sobic006G277550 Sobic006G277550 Sobic001G331301--Sobic006G277550 Sobic009G120000--Sobic004G166700 Sobic007G141500 Sobic007G141500 Sobic009G120000--Sobic007G141500 Sobic009G120000--Sobic005G051200 Sobic009G120000--Sobic001G317200 Sobic009G120000--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic001G243600 Sobic001G243600 Sobic009G120000--Sobic001G243600 Sobic009G120000--Sobic005G213200 Sobic005G045900--Sobic010G084100 Sobic005G045900--Sobic003G286600 Sobic005G045900--Sobic004G221500 Sobic003G317100 Sobic003G317100 Sobic005G045900--Sobic003G317100 Sobic005G045900--Sobic010G084700 Sobic007G155200 Sobic007G155200 Sobic005G045900--Sobic007G155200 Sobic010G044400 Sobic010G044400 Sobic005G045900--Sobic010G044400 Sobic006G084600 Sobic006G084600 Sobic005G045900--Sobic006G084600 Sobic005G045900--Sobic004G071650
Octagon: transcription factors


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