Gene annotation
Transcriptome id Sobic.001G339700.1
Synonym Sb01g032680
Functional annotation expressed protein
UniProt C5WWM5
Pfam PF06708
Panther DB PTHR34358 PTHR34358:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36660 : Protein of unknown function (DUF1195)
RAP-DB (Rice) LOC_Os03g29830.1 : expressed protein
MaizeGDB (Corn) Zm00025a052171
Brachypodium PNT74777 , KQK15305 , KQK00608
Barley HORVU2Hr1G084170.1 , HORVU2Hr1G084170.2
Wheat TraesCS2A02G345600 , TraesCS2A02G345600 , TraesCS2D02G344300 , TraesCS2B02G364100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
2 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.007G145600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
4 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
5 Sobic.003G252800 hypothetical protein -
6 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.008G025600 cyclin-dependent kinase B1-1, putative, expressed K07760: cyclin-dependent kinase
8 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.005G084600 ARGOS, putative, expressed -
10 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.001G070800 expressed protein -
12 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.005G206601 - -
14 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
15 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.002G199650 - -
17 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
18 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
20 Sobic.001G348700 - -


Gene co-expression network
sample Sobic001G339700 Sobic001G339700 Sobic001G533400 Sobic001G533400 Sobic001G339700--Sobic001G533400 Sobic001G317200 Sobic001G317200 Sobic001G339700--Sobic001G317200 Sobic007G145600 Sobic007G145600 Sobic001G339700--Sobic007G145600 Sobic010G084400 Sobic010G084400 Sobic001G339700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic001G339700--Sobic003G252800 Sobic006G099900 Sobic006G099900 Sobic001G339700--Sobic006G099900 Sobic008G025600 Sobic008G025600 Sobic001G339700--Sobic008G025600 Sobic005G101800 Sobic005G101800 Sobic001G339700--Sobic005G101800 Sobic005G084600 Sobic005G084600 Sobic001G339700--Sobic005G084600 Sobic001G533400--Sobic001G339700 Sobic010G001900 Sobic010G001900 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic002G201600 Sobic002G201600 Sobic001G533400--Sobic002G201600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic005G051200 Sobic005G051200 Sobic001G317200--Sobic005G051200 Sobic001G317200--Sobic006G099900 Sobic001G317200--Sobic003G252800 Sobic001G317200--Sobic010G084400 Sobic003G286600 Sobic003G286600 Sobic001G317200--Sobic003G286600 Sobic008G050600 Sobic008G050600 Sobic001G317200--Sobic008G050600 Sobic003G240600 Sobic003G240600 Sobic001G317200--Sobic003G240600 Sobic001G317200--Sobic005G101800 Sobic002G416600 Sobic002G416600 Sobic001G317200--Sobic002G416600 Sobic007G145600--Sobic001G317200 Sobic010G239300 Sobic010G239300 Sobic007G145600--Sobic010G239300 Sobic007G145600--Sobic001G339700 Sobic007G145600--Sobic001G119100 Sobic002G104900 Sobic002G104900 Sobic007G145600--Sobic002G104900 Sobic007G145600--Sobic010G084400 Sobic010G178500 Sobic010G178500 Sobic007G145600--Sobic010G178500 Sobic007G145600--Sobic001G252300 Sobic007G145600--Sobic003G252800 Sobic010G084400--Sobic003G252800 Sobic010G084400--Sobic005G101800 Sobic010G084400--Sobic006G099900 Sobic010G084400--Sobic001G317200 Sobic009G128700 Sobic009G128700 Sobic010G084400--Sobic009G128700 Sobic007G227300 Sobic007G227300 Sobic010G084400--Sobic007G227300 Sobic010G117900 Sobic010G117900 Sobic010G084400--Sobic010G117900 Sobic010G084400--Sobic010G239300 Sobic004G189400 Sobic004G189400 Sobic010G084400--Sobic004G189400 Sobic003G252800--Sobic006G099900 Sobic003G252800--Sobic010G084400 Sobic001G348700 Sobic001G348700 Sobic003G252800--Sobic001G348700 Sobic003G252800--Sobic001G317200 Sobic003G252800--Sobic005G101800 Sobic003G252800--Sobic007G227300 Sobic003G252800--Sobic010G117900 Sobic003G252800--Sobic009G128700 Sobic004G221500 Sobic004G221500 Sobic003G252800--Sobic004G221500 Sobic006G099900--Sobic007G227300 Sobic006G099900--Sobic003G252800 Sobic006G099900--Sobic001G317200 Sobic006G099900--Sobic003G286600 Sobic006G099900--Sobic010G084400 Sobic006G099900--Sobic004G189400 Sobic006G099900--Sobic008G050600 Sobic006G099900--Sobic005G091500 Sobic006G277600 Sobic006G277600 Sobic006G099900--Sobic006G277600 Sobic006G137800 Sobic006G137800 Sobic008G025600--Sobic006G137800 Sobic008G025600--Sobic004G205100 Sobic008G025600--Sobic001G339700 Sobic008G025600--Sobic006G099900 Sobic002G200600 Sobic002G200600 Sobic008G025600--Sobic002G200600 Sobic003G417800 Sobic003G417800 Sobic008G025600--Sobic003G417800 Sobic009G183400 Sobic009G183400 Sobic008G025600--Sobic009G183400 Sobic008G025600--Sobic007G227300 Sobic007G184600 Sobic007G184600 Sobic008G025600--Sobic007G184600 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic005G101800--Sobic001G317200 Sobic003G426300 Sobic003G426300 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic005G101800--Sobic009G128700 Sobic001G400800 Sobic001G400800 Sobic005G101800--Sobic001G400800 Sobic004G176600 Sobic004G176600 Sobic005G084600--Sobic004G176600 Sobic005G084600--Sobic001G339700 Sobic009G120000 Sobic009G120000 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G206601 Sobic005G206601 Sobic005G084600--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic010G185000 Sobic010G185000 Sobic005G084600--Sobic010G185000 Sobic005G084600--Sobic003G417800
Octagon: transcription factors


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