Gene annotation
Transcriptome id Sobic.008G025600.1
Synonym 1, CDKB1, CDC2B, Sb08g002240
Functional annotation cyclin-dependent kinase B1-1, putative, expressed
UniProt Q84YE5
Pfam PF07714
Panther DB PTHR24056 PTHR24056:SF178
NCBI CDD KOG0594; Protein kinase PCTAIRE and related kinases
KEGG Orthology K07760; cyclin-dependent kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G54180 : cyclin-dependent kinase B1;1
RAP-DB (Rice) LOC_Os01g67160.1 : cyclin-dependent kinase B1-1, putative, expressed
MaizeGDB (Corn) Zm00025a029006
Brachypodium KQJ92528 , KQJ89485
Barley HORVU4Hr1G023490.8 , HORVU4Hr1G023490.9 , HORVU4Hr1G023490.6 , HORVU4Hr1G023490.18 , HORVU4Hr1G023490.19 , HORVU4Hr1G023490.10 , HORVU4Hr1G023490.11 , HORVU4Hr1G023490.12 , HORVU4Hr1G023490.13 , HORVU4Hr1G023490.14 , HORVU4Hr1G023490.16 , HORVU4Hr1G023490.17 , HORVU4Hr1G023490.2 , HORVU4Hr1G023490.3 , HORVU4Hr1G023490.1 , HORVU4Hr1G023490.7 , HORVU4Hr1G023490.4 , HORVU4Hr1G023490.5 , HORVU4Hr1G023490.29 , HORVU4Hr1G023490.28 , HORVU4Hr1G023490.25 , HORVU4Hr1G023490.24 , HORVU4Hr1G023490.27 , HORVU4Hr1G023490.26 , HORVU4Hr1G023490.21 , HORVU4Hr1G023490.20 , HORVU4Hr1G023490.23 , HORVU4Hr1G023490.22 , HORVU4Hr1G023490.30 , HORVU4Hr1G023490.31 , HORVU5Hr1G046190.3 , HORVU5Hr1G046190.2 , HORVU5Hr1G046190.1 , HORVU5Hr1G046190.6 , HORVU5Hr1G046190.5 , HORVU5Hr1G046190.4
Wheat TraesCS4D02G121200 , TraesCS4D02G121200 , TraesCS5A02G145500 , TraesCS4B02G123100 , TraesCS4B02G123100 , TraesCS4A02G192300 , TraesCS5D02G147100 , TraesCS5D02G147100 , TraesCS5B02G144100 , TraesCS5B02G144100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G137800 expressed protein -
2 Sobic.004G205100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
3 Sobic.001G339700 expressed protein -
4 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.002G200600 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
6 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
8 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
10 Sobic.006G067800 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
11 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
12 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
16 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
17 Sobic.005G206601 - -
18 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
19 Sobic.003G252800 hypothetical protein -
20 Sobic.002G199650 - -


Gene co-expression network
sample Sobic008G025600 Sobic008G025600 Sobic006G137800 Sobic006G137800 Sobic008G025600--Sobic006G137800 Sobic004G205100 Sobic004G205100 Sobic008G025600--Sobic004G205100 Sobic001G339700 Sobic001G339700 Sobic008G025600--Sobic001G339700 Sobic006G099900 Sobic006G099900 Sobic008G025600--Sobic006G099900 Sobic002G200600 Sobic002G200600 Sobic008G025600--Sobic002G200600 Sobic003G417800 Sobic003G417800 Sobic008G025600--Sobic003G417800 Sobic009G183400 Sobic009G183400 Sobic008G025600--Sobic009G183400 Sobic007G227300 Sobic007G227300 Sobic008G025600--Sobic007G227300 Sobic007G184600 Sobic007G184600 Sobic008G025600--Sobic007G184600 Sobic009G159400 Sobic009G159400 Sobic006G137800--Sobic009G159400 Sobic006G137800--Sobic008G025600 Sobic004G321300 Sobic004G321300 Sobic006G137800--Sobic004G321300 Sobic001G140900 Sobic001G140900 Sobic006G137800--Sobic001G140900 Sobic006G137800--Sobic002G200600 Sobic001G038900 Sobic001G038900 Sobic006G137800--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic006G137800--Sobic008G050600 Sobic006G159600 Sobic006G159600 Sobic006G137800--Sobic006G159600 Sobic003G345100 Sobic003G345100 Sobic006G137800--Sobic003G345100 Sobic003G352300 Sobic003G352300 Sobic004G205100--Sobic003G352300 Sobic006G092500 Sobic006G092500 Sobic004G205100--Sobic006G092500 Sobic004G205100--Sobic009G183400 Sobic004G205100--Sobic009G159400 Sobic001G476500 Sobic001G476500 Sobic004G205100--Sobic001G476500 Sobic004G205100--Sobic007G184600 Sobic005G091500 Sobic005G091500 Sobic004G205100--Sobic005G091500 Sobic004G205100--Sobic006G099900 Sobic004G205100--Sobic003G417800 Sobic001G533400 Sobic001G533400 Sobic001G339700--Sobic001G533400 Sobic001G317200 Sobic001G317200 Sobic001G339700--Sobic001G317200 Sobic007G145600 Sobic007G145600 Sobic001G339700--Sobic007G145600 Sobic010G084400 Sobic010G084400 Sobic001G339700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic001G339700--Sobic003G252800 Sobic001G339700--Sobic006G099900 Sobic001G339700--Sobic008G025600 Sobic005G101800 Sobic005G101800 Sobic001G339700--Sobic005G101800 Sobic005G084600 Sobic005G084600 Sobic001G339700--Sobic005G084600 Sobic006G099900--Sobic007G227300 Sobic006G099900--Sobic003G252800 Sobic006G099900--Sobic001G317200 Sobic003G286600 Sobic003G286600 Sobic006G099900--Sobic003G286600 Sobic006G099900--Sobic010G084400 Sobic004G189400 Sobic004G189400 Sobic006G099900--Sobic004G189400 Sobic006G099900--Sobic008G050600 Sobic006G099900--Sobic005G091500 Sobic006G277600 Sobic006G277600 Sobic006G099900--Sobic006G277600 Sobic002G200600--Sobic007G184600 Sobic001G402050 Sobic001G402050 Sobic002G200600--Sobic001G402050 Sobic006G067800 Sobic006G067800 Sobic002G200600--Sobic006G067800 Sobic006G116700 Sobic006G116700 Sobic002G200600--Sobic006G116700 Sobic002G081600 Sobic002G081600 Sobic002G200600--Sobic002G081600 Sobic007G197800 Sobic007G197800 Sobic002G200600--Sobic007G197800 Sobic001G374700 Sobic001G374700 Sobic002G200600--Sobic001G374700 Sobic001G018900 Sobic001G018900 Sobic002G200600--Sobic001G018900 Sobic001G130301 Sobic001G130301 Sobic002G200600--Sobic001G130301 Sobic003G417800--Sobic001G476500 Sobic003G437200 Sobic003G437200 Sobic003G417800--Sobic003G437200 Sobic003G417800--Sobic009G183400 Sobic003G062600 Sobic003G062600 Sobic003G417800--Sobic003G062600 Sobic001G119400 Sobic001G119400 Sobic003G417800--Sobic001G119400 Sobic004G107700 Sobic004G107700 Sobic003G417800--Sobic004G107700 Sobic003G417800--Sobic006G099900 Sobic003G417800--Sobic003G352300 Sobic009G240600 Sobic009G240600 Sobic003G417800--Sobic009G240600 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic009G183400--Sobic006G092500 Sobic009G183400--Sobic001G038900 Sobic001G097600 Sobic001G097600 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic004G100700 Sobic004G100700 Sobic009G183400--Sobic004G100700 Sobic009G183400--Sobic001G140900 Sobic007G227300--Sobic006G099900 Sobic003G200700 Sobic003G200700 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic007G227300--Sobic003G252800 Sobic006G268800 Sobic006G268800 Sobic007G227300--Sobic006G268800 Sobic007G227300--Sobic006G277600 Sobic004G148200 Sobic004G148200 Sobic007G227300--Sobic004G148200 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic007G184600--Sobic002G200600 Sobic007G184600--Sobic001G374700 Sobic007G184600--Sobic001G402050 Sobic007G184600--Sobic002G081600 Sobic001G493001 Sobic001G493001 Sobic007G184600--Sobic001G493001 Sobic001G177800 Sobic001G177800 Sobic007G184600--Sobic001G177800 Sobic007G184600--Sobic006G067800 Sobic003G322400 Sobic003G322400 Sobic007G184600--Sobic003G322400 Sobic003G346600 Sobic003G346600 Sobic007G184600--Sobic003G346600
Octagon: transcription factors


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