Gene annotation
Transcriptome id Sobic.001G331301.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8V8
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT5G40010 : AAA-ATPase 1
RAP-DB (Rice) LOC_Os03g58790.1 : ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a047104 , Zm00025a016039 , Zm00025a052319 , Zm00025a000204 , Zm00025a008606
Brachypodium PNT76854 , PNT76855 , KQK20482 , KQK20481 , PNT76856 , PNT76857 , KQJ90344 , KQK20476 , KQK20474 , KQK20475
Barley HORVU1Hr1G093700.1 , HORVU2Hr1G046310.2 , HORVU2Hr1G046330.4 , HORVU2Hr1G046330.1 , HORVU2Hr1G046330.2 , HORVU2Hr1G046330.3 , HORVU2Hr1G046310.3 , HORVU2Hr1G046310.1 , HORVU1Hr1G093760.3 , HORVU1Hr1G093760.6 , HORVU1Hr1G093760.7 , HORVU1Hr1G093760.5 , HORVU6Hr1G021770.3 , HORVU6Hr1G021770.2 , HORVU6Hr1G021770.1 , HORVU6Hr1G021770.4 , HORVU5Hr1G107410.2 , HORVU5Hr1G107410.3 , HORVU5Hr1G107410.4 , HORVU5Hr1G063340.3 , HORVU5Hr1G063340.2 , HORVU5Hr1G063340.1
Wheat TraesCS1D02G439400 , TraesCS2B02G247000 , TraesCS3A02G357100 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS1A02G429800 , TraesCS3B02G389700 , TraesCS3D02G351000 , TraesCS1D02G438800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G128400 O-methyltransferase, putative, expressed -
2 Sobic.003G227300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY11, expressed -
3 Sobic.001G335600 RNA-binding protein-like, putative, expressed -
4 Sobic.004G111800 VQ domain containing protein, putative, expressed -
5 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
6 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.005G206601 - -
9 Sobic.006G277550 - K00430: peroxidase
10 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
11 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
12 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.001G320400 lysM domain containing protein, putative, expressed -
15 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G248500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
17 Sobic.004G071650 - -
18 Sobic.001G339700 expressed protein -
19 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
20 Sobic.001G348700 - -


Gene co-expression network
sample Sobic001G331301 Sobic001G331301 Sobic004G128400 Sobic004G128400 Sobic001G331301--Sobic004G128400 Sobic003G227300 Sobic003G227300 Sobic001G331301--Sobic003G227300 Sobic001G335600 Sobic001G335600 Sobic001G331301--Sobic001G335600 Sobic004G111800 Sobic004G111800 Sobic001G331301--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic001G331301--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G331301--Sobic001G243500 Sobic009G106800 Sobic009G106800 Sobic001G331301--Sobic009G106800 Sobic005G206601 Sobic005G206601 Sobic001G331301--Sobic005G206601 Sobic006G277550 Sobic006G277550 Sobic001G331301--Sobic006G277550 Sobic001G231600 Sobic001G231600 Sobic004G128400--Sobic001G231600 Sobic002G182500 Sobic002G182500 Sobic004G128400--Sobic002G182500 Sobic001G320400 Sobic001G320400 Sobic004G128400--Sobic001G320400 Sobic004G128400--Sobic001G331301 Sobic007G135201 Sobic007G135201 Sobic004G128400--Sobic007G135201 Sobic001G495164 Sobic001G495164 Sobic004G128400--Sobic001G495164 Sobic010G117900 Sobic010G117900 Sobic004G128400--Sobic010G117900 Sobic007G067600 Sobic007G067600 Sobic004G128400--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic004G128400--Sobic010G084700 Sobic001G119100 Sobic001G119100 Sobic003G227300--Sobic001G119100 Sobic002G183200 Sobic002G183200 Sobic003G227300--Sobic002G183200 Sobic001G025300 Sobic001G025300 Sobic003G227300--Sobic001G025300 Sobic007G145600 Sobic007G145600 Sobic003G227300--Sobic007G145600 Sobic001G339700 Sobic001G339700 Sobic003G227300--Sobic001G339700 Sobic004G071650 Sobic004G071650 Sobic003G227300--Sobic004G071650 Sobic003G227300--Sobic001G331301 Sobic009G120000 Sobic009G120000 Sobic003G227300--Sobic009G120000 Sobic005G045900 Sobic005G045900 Sobic003G227300--Sobic005G045900 Sobic001G335600--Sobic001G331301 Sobic001G335600--Sobic004G128400 Sobic001G335600--Sobic006G277550 Sobic001G335600--Sobic001G243500 Sobic009G158700 Sobic009G158700 Sobic001G335600--Sobic009G158700 Sobic002G018500 Sobic002G018500 Sobic001G335600--Sobic002G018500 Sobic005G156600 Sobic005G156600 Sobic001G335600--Sobic005G156600 Sobic001G248500 Sobic001G248500 Sobic001G335600--Sobic001G248500 Sobic002G182400 Sobic002G182400 Sobic001G335600--Sobic002G182400 Sobic001G444400 Sobic001G444400 Sobic004G111800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic004G111800--Sobic010G084400 Sobic006G153100 Sobic006G153100 Sobic004G111800--Sobic006G153100 Sobic004G111800--Sobic009G106800 Sobic003G252800 Sobic003G252800 Sobic004G111800--Sobic003G252800 Sobic005G101800 Sobic005G101800 Sobic004G111800--Sobic005G101800 Sobic004G111800--Sobic005G206601 Sobic001G348700 Sobic001G348700 Sobic004G111800--Sobic001G348700 Sobic004G111800--Sobic001G339700 Sobic001G100700 Sobic001G100700 Sobic005G213200--Sobic001G100700 Sobic001G243600 Sobic001G243600 Sobic005G213200--Sobic001G243600 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic005G213200--Sobic009G106800 Sobic005G213200--Sobic001G444400 Sobic004G273400 Sobic004G273400 Sobic005G213200--Sobic004G273400 Sobic010G071900 Sobic010G071900 Sobic005G213200--Sobic010G071900 Sobic010G209900 Sobic010G209900 Sobic005G213200--Sobic010G209900 Sobic001G243500--Sobic004G273400 Sobic001G243500--Sobic001G243600 Sobic001G243500--Sobic001G100700 Sobic001G243500--Sobic005G213200 Sobic002G346100 Sobic002G346100 Sobic001G243500--Sobic002G346100 Sobic001G243500--Sobic009G106800 Sobic001G243400 Sobic001G243400 Sobic001G243500--Sobic001G243400 Sobic002G200300 Sobic002G200300 Sobic001G243500--Sobic002G200300 Sobic001G243500--Sobic001G331301 Sobic009G106800--Sobic001G444400 Sobic009G106800--Sobic010G084400 Sobic009G196400 Sobic009G196400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic009G106800--Sobic003G252800 Sobic009G106800--Sobic006G153100 Sobic007G227300 Sobic007G227300 Sobic005G206601--Sobic007G227300 Sobic005G206601--Sobic003G252800 Sobic003G117600 Sobic003G117600 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic005G206601--Sobic001G348700 Sobic009G240600 Sobic009G240600 Sobic005G206601--Sobic009G240600 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic009G072900 Sobic009G072900 Sobic006G277550--Sobic009G072900 Sobic007G058300 Sobic007G058300 Sobic006G277550--Sobic007G058300 Sobic008G044500 Sobic008G044500 Sobic006G277550--Sobic008G044500 Sobic006G277550--Sobic005G213200 Sobic006G038800 Sobic006G038800 Sobic006G277550--Sobic006G038800 Sobic006G277550--Sobic001G331301 Sobic006G277550--Sobic001G243600 Sobic001G403000 Sobic001G403000 Sobic006G277550--Sobic001G403000 Sobic002G375400 Sobic002G375400 Sobic006G277550--Sobic002G375400
Octagon: transcription factors


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