Gene annotation
Transcriptome id Sobic.005G213200.1
Synonym Sb05g026530
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
protein kinase family protein, putative, expressed
UniProt C5Y7W7
Pfam PF13426 PF07714
Panther DB PTHR23257 PTHR23257:SF485
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G49470 : PAS domain-containing protein tyrosine kinase family protein
RAP-DB (Rice) LOC_Os12g37570.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029148
Brachypodium KQJ87250 , KQJ99862 , KQJ87249 , KQJ87248 , KQJ86280
Barley HORVU3Hr1G093140.23 , HORVU3Hr1G093140.22 , HORVU3Hr1G093140.21 , HORVU3Hr1G093140.20 , HORVU3Hr1G093140.27 , HORVU3Hr1G093140.26 , HORVU3Hr1G093140.25 , HORVU3Hr1G093140.24 , HORVU3Hr1G093140.29 , HORVU3Hr1G093140.28 , HORVU3Hr1G093140.30 , HORVU3Hr1G093140.31 , HORVU3Hr1G093140.32 , HORVU3Hr1G093140.34 , HORVU3Hr1G093140.35 , HORVU3Hr1G093140.36 , HORVU3Hr1G093140.37 , HORVU3Hr1G093140.38 , HORVU3Hr1G093140.39 , HORVU5Hr1G022360.14 , HORVU5Hr1G022360.15 , HORVU5Hr1G022360.16 , HORVU5Hr1G022360.17 , HORVU5Hr1G022360.10 , HORVU5Hr1G022360.11 , HORVU5Hr1G022360.12 , HORVU5Hr1G022360.13 , HORVU5Hr1G022360.18 , HORVU5Hr1G022360.19 , HORVU6Hr1G078810.23 , HORVU6Hr1G078810.22 , HORVU6Hr1G078810.27 , HORVU6Hr1G078810.26 , HORVU6Hr1G078810.25 , HORVU6Hr1G078810.24 , HORVU6Hr1G078810.29 , HORVU6Hr1G078810.28 , HORVU3Hr1G093140.18 , HORVU3Hr1G093140.19 , HORVU3Hr1G093140.13 , HORVU3Hr1G093140.10 , HORVU3Hr1G093140.16 , HORVU3Hr1G093140.17 , HORVU3Hr1G093140.14 , HORVU3Hr1G093140.15 , HORVU5Hr1G022360.21 , HORVU5Hr1G022360.20 , HORVU4Hr1G029350.9 , HORVU4Hr1G029350.8 , HORVU4Hr1G029350.3 , HORVU4Hr1G029350.2 , HORVU4Hr1G029350.1 , HORVU4Hr1G029350.6 , HORVU4Hr1G029350.5 , HORVU4Hr1G029350.4 , HORVU6Hr1G078810.31 , HORVU6Hr1G078810.32 , HORVU6Hr1G078810.33 , HORVU6Hr1G078810.34 , HORVU6Hr1G078810.35 , HORVU6Hr1G078810.36 , HORVU6Hr1G078810.37 , HORVU6Hr1G078810.38 , HORVU6Hr1G078810.39 , HORVU4Hr1G029350.19 , HORVU4Hr1G029350.18 , HORVU4Hr1G029350.13 , HORVU4Hr1G029350.12 , HORVU4Hr1G029350.11 , HORVU4Hr1G029350.10 , HORVU4Hr1G029350.16 , HORVU4Hr1G029350.15 , HORVU4Hr1G029350.14 , HORVU6Hr1G078810.19 , HORVU6Hr1G078810.10 , HORVU6Hr1G078810.1 , HORVU6Hr1G078810.7 , HORVU4Hr1G029350.23 , HORVU4Hr1G029350.20 , HORVU4Hr1G029350.21 , HORVU4Hr1G029350.26 , HORVU4Hr1G029350.27 , HORVU4Hr1G029350.24 , HORVU4Hr1G029350.25 , HORVU4Hr1G029350.28 , HORVU4Hr1G029350.29 , HORVU6Hr1G078810.40 , HORVU6Hr1G078810.43 , HORVU6Hr1G078810.42 , HORVU6Hr1G078810.45 , HORVU6Hr1G078810.44 , HORVU5Hr1G022360.8 , HORVU5Hr1G022360.9 , HORVU5Hr1G022360.6 , HORVU5Hr1G022360.7 , HORVU5Hr1G022360.4 , HORVU5Hr1G022360.5 , HORVU5Hr1G022360.2 , HORVU5Hr1G022360.3 , HORVU5Hr1G022360.1 , HORVU6Hr1G078810.41 , HORVU6Hr1G078810.48 , HORVU6Hr1G078810.46 , HORVU3Hr1G093140.2 , HORVU3Hr1G093140.3 , HORVU3Hr1G093140.4 , HORVU3Hr1G093140.5 , HORVU3Hr1G093140.7 , HORVU3Hr1G093140.8
Wheat TraesCS5D02G097900 , TraesCS4B02G127400 , TraesCS4B02G127400 , TraesCS4B02G127400 , TraesCS4B02G127400 , TraesCS4B02G127400 , TraesCS4B02G127400 , TraesCS6B02G352700 , TraesCS6A02G321900 , TraesCS6A02G321900 , TraesCS4A02G171500 , TraesCS4A02G171500 , TraesCS4A02G171500 , TraesCS4A02G171500 , TraesCSU02G156700 , TraesCS6D02G301700 , TraesCS6D02G301700 , TraesCS6D02G301700 , TraesCS4B02G127400 , TraesCS5D02G405800 , TraesCSU02G156700 , TraesCSU02G156700 , TraesCSU02G156700 , TraesCSU02G156700 , TraesCSU02G156700 , TraesCSU02G156700 , TraesCS4D02G143700 , TraesCS4D02G143700 , TraesCS4D02G143700 , TraesCS4D02G143700 , TraesCS4D02G143700 , TraesCS3D02G415800 , TraesCS5B02G091700 , TraesCS3D02G415900 , TraesCS3D02G415900 , TraesCS5B02G401200 , TraesCS5B02G401200 , TraesCS5A02G085900 , TraesCS5D02G405700
Populus PNT16537 , PNT16539 , PNT16538


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
2 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.009G120000 - -
5 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
8 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
10 Sobic.005G084600 ARGOS, putative, expressed -
11 Sobic.003G227300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY11, expressed -
12 Sobic.001G331301 - -
13 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.006G277550 - K00430: peroxidase
15 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.002G200300 no apical meristem protein, putative, expressed -
17 Sobic.005G206601 - -
18 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -
19 Sobic.004G111800 VQ domain containing protein, putative, expressed -
20 Sobic.001G348700 - -


Gene co-expression network
sample Sobic005G213200 Sobic005G213200 Sobic001G100700 Sobic001G100700 Sobic005G213200--Sobic001G100700 Sobic001G243600 Sobic001G243600 Sobic005G213200--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic005G213200--Sobic001G243500 Sobic009G120000 Sobic009G120000 Sobic005G213200--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic005G213200--Sobic009G106800 Sobic001G444400 Sobic001G444400 Sobic005G213200--Sobic001G444400 Sobic004G273400 Sobic004G273400 Sobic005G213200--Sobic004G273400 Sobic010G071900 Sobic010G071900 Sobic005G213200--Sobic010G071900 Sobic010G209900 Sobic010G209900 Sobic005G213200--Sobic010G209900 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic001G243600--Sobic004G273400 Sobic001G243600--Sobic005G213200 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic001G243600--Sobic009G106800 Sobic005G084600 Sobic005G084600 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400 Sobic001G243500--Sobic004G273400 Sobic001G243500--Sobic001G243600 Sobic001G243500--Sobic001G100700 Sobic001G243500--Sobic005G213200 Sobic002G346100 Sobic002G346100 Sobic001G243500--Sobic002G346100 Sobic001G243500--Sobic009G106800 Sobic001G243400 Sobic001G243400 Sobic001G243500--Sobic001G243400 Sobic002G200300 Sobic002G200300 Sobic001G243500--Sobic002G200300 Sobic001G331301 Sobic001G331301 Sobic001G243500--Sobic001G331301 Sobic004G166700 Sobic004G166700 Sobic009G120000--Sobic004G166700 Sobic007G141500 Sobic007G141500 Sobic009G120000--Sobic007G141500 Sobic005G051200 Sobic005G051200 Sobic009G120000--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic009G120000--Sobic001G317200 Sobic009G120000--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic009G120000--Sobic001G243600 Sobic009G120000--Sobic005G213200 Sobic009G106800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic009G106800--Sobic010G084400 Sobic009G196400 Sobic009G196400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic004G111800 Sobic004G111800 Sobic009G106800--Sobic004G111800 Sobic009G106800--Sobic005G213200 Sobic009G106800--Sobic001G243600 Sobic003G252800 Sobic003G252800 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100 Sobic001G444400--Sobic006G153100 Sobic001G444400--Sobic010G084400 Sobic001G444400--Sobic009G106800 Sobic001G444400--Sobic009G196400 Sobic001G444400--Sobic007G141500 Sobic001G444400--Sobic003G252800 Sobic001G444400--Sobic004G111800 Sobic001G444400--Sobic001G100700 Sobic003G426300 Sobic003G426300 Sobic001G444400--Sobic003G426300 Sobic004G273400--Sobic001G243600 Sobic004G273400--Sobic001G243500 Sobic004G273400--Sobic001G100700 Sobic004G273400--Sobic005G213200 Sobic004G273400--Sobic009G106800 Sobic004G273400--Sobic001G444400 Sobic004G273400--Sobic006G153100 Sobic004G333150 Sobic004G333150 Sobic004G273400--Sobic004G333150 Sobic004G273400--Sobic007G141500 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic010G071900--Sobic005G213200 Sobic010G185500 Sobic010G185500 Sobic010G071900--Sobic010G185500 Sobic010G071900--Sobic001G100700 Sobic010G071900--Sobic009G120000 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic010G071900--Sobic005G084600 Sobic005G058800 Sobic005G058800 Sobic010G209900--Sobic005G058800 Sobic001G339700 Sobic001G339700 Sobic010G209900--Sobic001G339700 Sobic001G025300 Sobic001G025300 Sobic010G209900--Sobic001G025300 Sobic010G209900--Sobic005G084600 Sobic010G209900--Sobic001G100700 Sobic002G312900 Sobic002G312900 Sobic010G209900--Sobic002G312900 Sobic010G209900--Sobic009G120000 Sobic001G533400 Sobic001G533400 Sobic010G209900--Sobic001G533400 Sobic010G209900--Sobic001G444400
Octagon: transcription factors


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