Gene annotation
Transcriptome id Sobic.004G111800.2
Synonym Sb04g009150
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1Z5RMW2
Pfam PF05678
Panther DB PTHR34777 PTHR34777:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g15280.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT66275
Barley HORVU4Hr1G076660.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.003G252800 hypothetical protein -
6 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
7 Sobic.005G206601 - -
8 Sobic.001G348700 - -
9 Sobic.001G339700 expressed protein -
10 Sobic.001G063000 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
13 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
14 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
16 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.001G331301 - -
18 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
19 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
20 Sobic.005G101700 dirigent, putative, expressed -


Gene co-expression network
sample Sobic004G111800 Sobic004G111800 Sobic001G444400 Sobic001G444400 Sobic004G111800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic004G111800--Sobic010G084400 Sobic006G153100 Sobic006G153100 Sobic004G111800--Sobic006G153100 Sobic009G106800 Sobic009G106800 Sobic004G111800--Sobic009G106800 Sobic003G252800 Sobic003G252800 Sobic004G111800--Sobic003G252800 Sobic005G101800 Sobic005G101800 Sobic004G111800--Sobic005G101800 Sobic005G206601 Sobic005G206601 Sobic004G111800--Sobic005G206601 Sobic001G348700 Sobic001G348700 Sobic004G111800--Sobic001G348700 Sobic001G339700 Sobic001G339700 Sobic004G111800--Sobic001G339700 Sobic001G444400--Sobic006G153100 Sobic001G444400--Sobic010G084400 Sobic001G444400--Sobic009G106800 Sobic009G196400 Sobic009G196400 Sobic001G444400--Sobic009G196400 Sobic007G141500 Sobic007G141500 Sobic001G444400--Sobic007G141500 Sobic001G444400--Sobic003G252800 Sobic001G444400--Sobic004G111800 Sobic001G100700 Sobic001G100700 Sobic001G444400--Sobic001G100700 Sobic003G426300 Sobic003G426300 Sobic001G444400--Sobic003G426300 Sobic010G084400--Sobic003G252800 Sobic010G084400--Sobic005G101800 Sobic006G099900 Sobic006G099900 Sobic010G084400--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic010G084400--Sobic001G317200 Sobic009G128700 Sobic009G128700 Sobic010G084400--Sobic009G128700 Sobic007G227300 Sobic007G227300 Sobic010G084400--Sobic007G227300 Sobic010G117900 Sobic010G117900 Sobic010G084400--Sobic010G117900 Sobic010G239300 Sobic010G239300 Sobic010G084400--Sobic010G239300 Sobic004G189400 Sobic004G189400 Sobic010G084400--Sobic004G189400 Sobic006G153100--Sobic001G444400 Sobic006G153100--Sobic007G141500 Sobic003G117600 Sobic003G117600 Sobic006G153100--Sobic003G117600 Sobic002G416600 Sobic002G416600 Sobic006G153100--Sobic002G416600 Sobic006G153100--Sobic010G084400 Sobic005G179200 Sobic005G179200 Sobic006G153100--Sobic005G179200 Sobic006G153100--Sobic003G252800 Sobic002G199650 Sobic002G199650 Sobic006G153100--Sobic002G199650 Sobic006G153100--Sobic009G196400 Sobic009G106800--Sobic001G444400 Sobic009G106800--Sobic010G084400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic009G106800--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic009G106800--Sobic005G213200 Sobic001G243600 Sobic001G243600 Sobic009G106800--Sobic001G243600 Sobic009G106800--Sobic003G252800 Sobic009G106800--Sobic006G153100 Sobic003G252800--Sobic006G099900 Sobic003G252800--Sobic010G084400 Sobic003G252800--Sobic001G348700 Sobic003G252800--Sobic001G317200 Sobic003G252800--Sobic005G101800 Sobic003G252800--Sobic007G227300 Sobic003G252800--Sobic010G117900 Sobic003G252800--Sobic009G128700 Sobic004G221500 Sobic004G221500 Sobic003G252800--Sobic004G221500 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic005G101800--Sobic001G317200 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic005G101800--Sobic009G128700 Sobic001G400800 Sobic001G400800 Sobic005G101800--Sobic001G400800 Sobic005G206601--Sobic007G227300 Sobic005G206601--Sobic003G252800 Sobic005G206601--Sobic003G117600 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic005G206601--Sobic001G348700 Sobic009G240600 Sobic009G240600 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic005G206601--Sobic001G400800 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic006G084600 Sobic006G084600 Sobic001G348700--Sobic006G084600 Sobic001G348700--Sobic010G117900 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic001G348700--Sobic006G099900 Sobic001G348700--Sobic001G317200 Sobic001G533400 Sobic001G533400 Sobic001G339700--Sobic001G533400 Sobic001G339700--Sobic001G317200 Sobic007G145600 Sobic007G145600 Sobic001G339700--Sobic007G145600 Sobic001G339700--Sobic010G084400 Sobic001G339700--Sobic003G252800 Sobic001G339700--Sobic006G099900 Sobic008G025600 Sobic008G025600 Sobic001G339700--Sobic008G025600 Sobic001G339700--Sobic005G101800 Sobic005G084600 Sobic005G084600 Sobic001G339700--Sobic005G084600
Octagon: transcription factors


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