Gene annotation
Transcriptome id Sobic.005G179200.1
Synonym Sb05g023820
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsWAK112d - OsWAK receptor-like protein kinase, expressed
UniProt A0A1Z5RJS4
Pfam PF07645 PF13947 PF00069
Panther DB PTHR27005 PTHR27005:SF62
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005509; calcium ion binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G69730 : Wall-associated kinase family protein
RAP-DB (Rice) LOC_Os10g10130.1 : OsWAK112d - OsWAK receptor-like protein kinase, expressed
MaizeGDB (Corn) -
Brachypodium KQK15401
Barley HORVU6Hr1G088880.8 , HORVU6Hr1G088880.9 , HORVU6Hr1G088880.7 , HORVU6Hr1G088880.3
Wheat TraesCS1B02G020200 , TraesCS2B02G617400 , TraesCS6D02G361400 , TraesCS1A02G016300 , TraesCS7B02G371300 , TraesCS7B02G371500 , TraesCS5A02G464700 , TraesCS7B02G371400 , TraesCS6A02G377700 , TraesCS5D02G452300 , TraesCS7D02G457100 , TraesCS6A02G377600 , TraesCS1D02G014900 , TraesCS3A02G521900 , TraesCS5D02G477400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
3 Sobic.005G206601 - -
4 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
5 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.005G063100 expressed protein -
7 Sobic.004G071650 - -
8 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
9 Sobic.005G101700 dirigent, putative, expressed -
10 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
12 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
13 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
15 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.004G111800 VQ domain containing protein, putative, expressed -
17 Sobic.005G101600 dirigent, putative, expressed -
18 Sobic.010G176600 - -
19 Sobic.001G050100 Cupin domain containing protein, expressed -
20 Sobic.004G189400 expressed protein -


Gene co-expression network
sample Sobic005G179200 Sobic005G179200 Sobic006G153100 Sobic006G153100 Sobic005G179200--Sobic006G153100 Sobic003G117600 Sobic003G117600 Sobic005G179200--Sobic003G117600 Sobic005G206601 Sobic005G206601 Sobic005G179200--Sobic005G206601 Sobic010G084700 Sobic010G084700 Sobic005G179200--Sobic010G084700 Sobic001G444400 Sobic001G444400 Sobic005G179200--Sobic001G444400 Sobic005G063100 Sobic005G063100 Sobic005G179200--Sobic005G063100 Sobic004G071650 Sobic004G071650 Sobic005G179200--Sobic004G071650 Sobic005G051200 Sobic005G051200 Sobic005G179200--Sobic005G051200 Sobic005G101700 Sobic005G101700 Sobic005G179200--Sobic005G101700 Sobic006G153100--Sobic001G444400 Sobic007G141500 Sobic007G141500 Sobic006G153100--Sobic007G141500 Sobic006G153100--Sobic003G117600 Sobic002G416600 Sobic002G416600 Sobic006G153100--Sobic002G416600 Sobic010G084400 Sobic010G084400 Sobic006G153100--Sobic010G084400 Sobic006G153100--Sobic005G179200 Sobic003G252800 Sobic003G252800 Sobic006G153100--Sobic003G252800 Sobic002G199650 Sobic002G199650 Sobic006G153100--Sobic002G199650 Sobic009G196400 Sobic009G196400 Sobic006G153100--Sobic009G196400 Sobic006G277600 Sobic006G277600 Sobic003G117600--Sobic006G277600 Sobic003G117600--Sobic007G141500 Sobic003G117600--Sobic005G063100 Sobic006G092500 Sobic006G092500 Sobic003G117600--Sobic006G092500 Sobic003G117600--Sobic005G206601 Sobic003G117600--Sobic006G153100 Sobic001G325400 Sobic001G325400 Sobic003G117600--Sobic001G325400 Sobic002G354100 Sobic002G354100 Sobic003G117600--Sobic002G354100 Sobic005G091500 Sobic005G091500 Sobic003G117600--Sobic005G091500 Sobic007G227300 Sobic007G227300 Sobic005G206601--Sobic007G227300 Sobic005G206601--Sobic003G252800 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic009G240600 Sobic009G240600 Sobic005G206601--Sobic009G240600 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic004G221500 Sobic004G221500 Sobic010G084700--Sobic004G221500 Sobic010G084100 Sobic010G084100 Sobic010G084700--Sobic010G084100 Sobic010G117900 Sobic010G117900 Sobic010G084700--Sobic010G117900 Sobic002G184200 Sobic002G184200 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic010G084700--Sobic001G348700 Sobic001G423800 Sobic001G423800 Sobic010G084700--Sobic001G423800 Sobic001G192200 Sobic001G192200 Sobic010G084700--Sobic001G192200 Sobic001G444400--Sobic006G153100 Sobic001G444400--Sobic010G084400 Sobic009G106800 Sobic009G106800 Sobic001G444400--Sobic009G106800 Sobic001G444400--Sobic009G196400 Sobic001G444400--Sobic007G141500 Sobic001G444400--Sobic003G252800 Sobic004G111800 Sobic004G111800 Sobic001G444400--Sobic004G111800 Sobic001G100700 Sobic001G100700 Sobic001G444400--Sobic001G100700 Sobic003G426300 Sobic003G426300 Sobic001G444400--Sobic003G426300 Sobic008G050600 Sobic008G050600 Sobic005G063100--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic005G063100--Sobic003G345100 Sobic005G063100--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic005G063100--Sobic001G140900 Sobic005G099000 Sobic005G099000 Sobic005G063100--Sobic005G099000 Sobic009G234100 Sobic009G234100 Sobic005G063100--Sobic009G234100 Sobic005G063100--Sobic005G091500 Sobic004G208700 Sobic004G208700 Sobic005G063100--Sobic004G208700 Sobic001G435000 Sobic001G435000 Sobic005G063100--Sobic001G435000 Sobic004G071650--Sobic010G084100 Sobic004G071650--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic004G071650--Sobic003G116800 Sobic005G045900 Sobic005G045900 Sobic004G071650--Sobic005G045900 Sobic004G071650--Sobic003G286600 Sobic004G071650--Sobic001G348700 Sobic004G071650--Sobic004G221500 Sobic004G071650--Sobic005G206601 Sobic001G487300 Sobic001G487300 Sobic004G071650--Sobic001G487300 Sobic001G317200 Sobic001G317200 Sobic005G051200--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic005G051200--Sobic009G035200 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic009G164600 Sobic009G164600 Sobic005G051200--Sobic009G164600 Sobic005G051200--Sobic003G345100 Sobic005G051200--Sobic003G286600 Sobic005G051200--Sobic005G063100 Sobic001G252300 Sobic001G252300 Sobic005G051200--Sobic001G252300 Sobic005G101600 Sobic005G101600 Sobic005G101700--Sobic005G101600 Sobic001G318600 Sobic001G318600 Sobic005G101700--Sobic001G318600 Sobic003G200700 Sobic003G200700 Sobic005G101700--Sobic003G200700 Sobic005G101700--Sobic007G227300 Sobic005G101800 Sobic005G101800 Sobic005G101700--Sobic005G101800 Sobic005G101700--Sobic001G400800 Sobic005G101700--Sobic010G084400 Sobic005G101700--Sobic010G117900 Sobic004G148200 Sobic004G148200 Sobic005G101700--Sobic004G148200
Octagon: transcription factors


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