Gene annotation
Transcriptome id Sobic.001G063000.1
Synonym Sb01g005720
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5WY46
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF230
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06570 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g57640.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a001609 , Zm00025a047289 , Zm00025a016606 , Zm00025a014087
Brachypodium KQK12830
Barley HORVU6Hr1G077260.1 , HORVU5Hr1G103770.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G063000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
4 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
5 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G252800 hypothetical protein -
7 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.004G111800 VQ domain containing protein, putative, expressed -
10 Sobic.009G153100 zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
11 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
13 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
14 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
15 Sobic.007G061300 - -
16 Sobic.003G280100 expressed protein -
17 Sobic.004G148200 Cupin domain containing protein, expressed -
18 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic001G063000 Sobic001G063000 Sobic003G426300 Sobic003G426300 Sobic001G063000--Sobic003G426300 Sobic010G084400 Sobic010G084400 Sobic001G063000--Sobic010G084400 Sobic005G101800 Sobic005G101800 Sobic001G063000--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic001G063000--Sobic009G128700 Sobic001G444400 Sobic001G444400 Sobic001G063000--Sobic001G444400 Sobic003G252800 Sobic003G252800 Sobic001G063000--Sobic003G252800 Sobic004G245800 Sobic004G245800 Sobic001G063000--Sobic004G245800 Sobic001G400800 Sobic001G400800 Sobic001G063000--Sobic001G400800 Sobic004G111800 Sobic004G111800 Sobic001G063000--Sobic004G111800 Sobic003G426300--Sobic005G101800 Sobic003G426300--Sobic009G128700 Sobic003G426300--Sobic010G084400 Sobic003G426000 Sobic003G426000 Sobic003G426300--Sobic003G426000 Sobic003G426300--Sobic003G252800 Sobic003G426300--Sobic001G063000 Sobic010G117900 Sobic010G117900 Sobic003G426300--Sobic010G117900 Sobic007G227300 Sobic007G227300 Sobic003G426300--Sobic007G227300 Sobic003G426300--Sobic001G400800 Sobic010G084400--Sobic003G252800 Sobic010G084400--Sobic005G101800 Sobic006G099900 Sobic006G099900 Sobic010G084400--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic010G084400--Sobic001G317200 Sobic010G084400--Sobic009G128700 Sobic010G084400--Sobic007G227300 Sobic010G084400--Sobic010G117900 Sobic010G239300 Sobic010G239300 Sobic010G084400--Sobic010G239300 Sobic004G189400 Sobic004G189400 Sobic010G084400--Sobic004G189400 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic005G101800--Sobic001G317200 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic005G101800--Sobic009G128700 Sobic005G101800--Sobic001G400800 Sobic009G128700--Sobic010G084400 Sobic009G128700--Sobic003G252800 Sobic009G128700--Sobic003G426300 Sobic009G128700--Sobic005G101800 Sobic009G128700--Sobic010G239300 Sobic002G415100 Sobic002G415100 Sobic009G128700--Sobic002G415100 Sobic009G128700--Sobic003G426000 Sobic009G128700--Sobic006G099900 Sobic003G280200 Sobic003G280200 Sobic009G128700--Sobic003G280200 Sobic006G153100 Sobic006G153100 Sobic001G444400--Sobic006G153100 Sobic001G444400--Sobic010G084400 Sobic009G106800 Sobic009G106800 Sobic001G444400--Sobic009G106800 Sobic009G196400 Sobic009G196400 Sobic001G444400--Sobic009G196400 Sobic007G141500 Sobic007G141500 Sobic001G444400--Sobic007G141500 Sobic001G444400--Sobic003G252800 Sobic001G444400--Sobic004G111800 Sobic001G100700 Sobic001G100700 Sobic001G444400--Sobic001G100700 Sobic001G444400--Sobic003G426300 Sobic003G252800--Sobic006G099900 Sobic003G252800--Sobic010G084400 Sobic001G348700 Sobic001G348700 Sobic003G252800--Sobic001G348700 Sobic003G252800--Sobic001G317200 Sobic003G252800--Sobic005G101800 Sobic003G252800--Sobic007G227300 Sobic003G252800--Sobic010G117900 Sobic003G252800--Sobic009G128700 Sobic004G221500 Sobic004G221500 Sobic003G252800--Sobic004G221500 Sobic004G245800--Sobic001G400800 Sobic001G400700 Sobic001G400700 Sobic004G245800--Sobic001G400700 Sobic004G245800--Sobic005G101800 Sobic001G187200 Sobic001G187200 Sobic004G245800--Sobic001G187200 Sobic001G177800 Sobic001G177800 Sobic004G245800--Sobic001G177800 Sobic004G245800--Sobic003G252800 Sobic004G245800--Sobic007G227300 Sobic004G245800--Sobic010G084400 Sobic005G029200 Sobic005G029200 Sobic004G245800--Sobic005G029200 Sobic001G400800--Sobic007G227300 Sobic001G400800--Sobic001G400700 Sobic001G400800--Sobic004G245800 Sobic001G400800--Sobic005G101800 Sobic001G400800--Sobic003G252800 Sobic001G400800--Sobic001G177800 Sobic001G400800--Sobic006G099900 Sobic001G400800--Sobic010G084400 Sobic001G400800--Sobic001G187200 Sobic004G111800--Sobic001G444400 Sobic004G111800--Sobic010G084400 Sobic004G111800--Sobic006G153100 Sobic004G111800--Sobic009G106800 Sobic004G111800--Sobic003G252800 Sobic004G111800--Sobic005G101800 Sobic005G206601 Sobic005G206601 Sobic004G111800--Sobic005G206601 Sobic004G111800--Sobic001G348700 Sobic001G339700 Sobic001G339700 Sobic004G111800--Sobic001G339700
Octagon: transcription factors


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