Gene annotation
Transcriptome id Sobic.003G280100.1
Synonym Sb03g033170
Functional annotation expressed protein
UniProt C5XIE2
Pfam -
Panther DB PTHR34278 PTHR34278:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g32670.1 : expressed protein
MaizeGDB (Corn) Zm00025a027751 , Zm00025a027747
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G148200 Cupin domain containing protein, expressed -
2 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
3 Sobic.010G072100 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
4 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
5 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
6 Sobic.010G213700 GDU1, putative, expressed -
7 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
8 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.004G052300 - -
11 Sobic.003G236450 - -
12 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
13 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.007G061300 - -
18 Sobic.005G101700 dirigent, putative, expressed -
19 Sobic.001G318600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -


Gene co-expression network
sample Sobic003G280100 Sobic003G280100 Sobic004G148200 Sobic004G148200 Sobic003G280100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G280100--Sobic005G029200 Sobic010G072100 Sobic010G072100 Sobic003G280100--Sobic010G072100 Sobic003G437100 Sobic003G437100 Sobic003G280100--Sobic003G437100 Sobic003G417700 Sobic003G417700 Sobic003G280100--Sobic003G417700 Sobic010G213700 Sobic010G213700 Sobic003G280100--Sobic010G213700 Sobic009G128700 Sobic009G128700 Sobic003G280100--Sobic009G128700 Sobic003G426300 Sobic003G426300 Sobic003G280100--Sobic003G426300 Sobic007G227300 Sobic007G227300 Sobic003G280100--Sobic007G227300 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G189400 Sobic004G189400 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic006G268800 Sobic006G268800 Sobic004G148200--Sobic006G268800 Sobic009G145500 Sobic009G145500 Sobic004G148200--Sobic009G145500 Sobic003G200700 Sobic003G200700 Sobic004G148200--Sobic003G200700 Sobic005G029200--Sobic004G189400 Sobic005G029200--Sobic004G148200 Sobic003G297600 Sobic003G297600 Sobic005G029200--Sobic003G297600 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic009G077800 Sobic009G077800 Sobic005G029200--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic005G029200--Sobic009G139400 Sobic001G423800 Sobic001G423800 Sobic005G029200--Sobic001G423800 Sobic010G072100--Sobic003G280100 Sobic003G426000 Sobic003G426000 Sobic010G072100--Sobic003G426000 Sobic010G072100--Sobic003G437100 Sobic010G102200 Sobic010G102200 Sobic010G072100--Sobic010G102200 Sobic010G072100--Sobic009G128700 Sobic010G072100--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic010G072100--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic010G072100--Sobic007G067600 Sobic010G072100--Sobic004G148200 Sobic003G437100--Sobic003G280100 Sobic005G206601 Sobic005G206601 Sobic003G437100--Sobic005G206601 Sobic003G437100--Sobic007G227300 Sobic003G437100--Sobic005G101800 Sobic003G437100--Sobic003G426300 Sobic003G437100--Sobic007G067600 Sobic005G101700 Sobic005G101700 Sobic003G437100--Sobic005G101700 Sobic010G084400 Sobic010G084400 Sobic003G437100--Sobic010G084400 Sobic002G247600 Sobic002G247600 Sobic003G437100--Sobic002G247600 Sobic003G280200 Sobic003G280200 Sobic003G417700--Sobic003G280200 Sobic003G156200 Sobic003G156200 Sobic003G417700--Sobic003G156200 Sobic003G417700--Sobic004G148200 Sobic003G417700--Sobic005G029200 Sobic003G417700--Sobic009G128700 Sobic003G417700--Sobic003G280100 Sobic003G417700--Sobic010G213700 Sobic003G417700--Sobic003G426000 Sobic008G158100 Sobic008G158100 Sobic003G417700--Sobic008G158100 Sobic010G213700--Sobic005G029200 Sobic002G366600 Sobic002G366600 Sobic010G213700--Sobic002G366600 Sobic001G119400 Sobic001G119400 Sobic010G213700--Sobic001G119400 Sobic010G213700--Sobic009G139400 Sobic010G213700--Sobic004G148200 Sobic010G213700--Sobic003G297600 Sobic002G415100 Sobic002G415100 Sobic010G213700--Sobic002G415100 Sobic010G213700--Sobic004G189400 Sobic010G213700--Sobic003G280200 Sobic009G128700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic009G128700--Sobic003G252800 Sobic009G128700--Sobic003G426300 Sobic009G128700--Sobic005G101800 Sobic010G239300 Sobic010G239300 Sobic009G128700--Sobic010G239300 Sobic009G128700--Sobic002G415100 Sobic009G128700--Sobic003G426000 Sobic006G099900 Sobic006G099900 Sobic009G128700--Sobic006G099900 Sobic009G128700--Sobic003G280200 Sobic003G426300--Sobic005G101800 Sobic003G426300--Sobic009G128700 Sobic003G426300--Sobic010G084400 Sobic003G426300--Sobic003G426000 Sobic003G426300--Sobic003G252800 Sobic001G063000 Sobic001G063000 Sobic003G426300--Sobic001G063000 Sobic010G117900 Sobic010G117900 Sobic003G426300--Sobic010G117900 Sobic003G426300--Sobic007G227300 Sobic001G400800 Sobic001G400800 Sobic003G426300--Sobic001G400800 Sobic007G227300--Sobic006G099900 Sobic007G227300--Sobic003G200700 Sobic007G227300--Sobic001G400800 Sobic007G227300--Sobic003G252800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic007G227300--Sobic005G206601
Octagon: transcription factors


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