Gene annotation
Transcriptome id Sobic.003G236450.1
Synonym -
Functional annotation -
UniProt A0A1W0VYM1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
2 Sobic.003G280100 expressed protein -
3 Sobic.009G077800 expressed protein -
4 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
5 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
6 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
8 Sobic.001G070800 expressed protein -
9 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
11 Sobic.004G052300 - -
12 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.002G366600 expressed protein -
14 Sobic.009G229000 expressed protein -
15 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
17 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
18 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
19 Sobic.003G087300 nuclease PA3, putative, expressed -
20 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G236450 Sobic003G236450 Sobic003G297600 Sobic003G297600 Sobic003G236450--Sobic003G297600 Sobic003G280100 Sobic003G280100 Sobic003G236450--Sobic003G280100 Sobic009G077800 Sobic009G077800 Sobic003G236450--Sobic009G077800 Sobic007G141500 Sobic007G141500 Sobic003G236450--Sobic007G141500 Sobic006G153100 Sobic006G153100 Sobic003G236450--Sobic006G153100 Sobic003G280200 Sobic003G280200 Sobic003G236450--Sobic003G280200 Sobic001G325400 Sobic001G325400 Sobic003G236450--Sobic001G325400 Sobic001G070800 Sobic001G070800 Sobic003G236450--Sobic001G070800 Sobic002G415100 Sobic002G415100 Sobic003G236450--Sobic002G415100 Sobic003G297600--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic003G297600--Sobic009G139400 Sobic003G297600--Sobic001G070800 Sobic005G029200 Sobic005G029200 Sobic003G297600--Sobic005G029200 Sobic004G189400 Sobic004G189400 Sobic003G297600--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic003G297600--Sobic008G050600 Sobic001G317200 Sobic001G317200 Sobic003G297600--Sobic001G317200 Sobic005G091500 Sobic005G091500 Sobic003G297600--Sobic005G091500 Sobic002G055700 Sobic002G055700 Sobic003G297600--Sobic002G055700 Sobic004G148200 Sobic004G148200 Sobic003G280100--Sobic004G148200 Sobic003G280100--Sobic005G029200 Sobic010G072100 Sobic010G072100 Sobic003G280100--Sobic010G072100 Sobic003G437100 Sobic003G437100 Sobic003G280100--Sobic003G437100 Sobic003G417700 Sobic003G417700 Sobic003G280100--Sobic003G417700 Sobic010G213700 Sobic010G213700 Sobic003G280100--Sobic010G213700 Sobic009G128700 Sobic009G128700 Sobic003G280100--Sobic009G128700 Sobic003G426300 Sobic003G426300 Sobic003G280100--Sobic003G426300 Sobic007G227300 Sobic007G227300 Sobic003G280100--Sobic007G227300 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic009G077800--Sobic001G070800 Sobic009G077800--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic009G077800--Sobic002G017800 Sobic009G077800--Sobic005G029200 Sobic009G077800--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic009G077800--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic007G141500--Sobic003G117600 Sobic007G141500--Sobic006G153100 Sobic003G087300 Sobic003G087300 Sobic007G141500--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic007G141500--Sobic002G416600 Sobic002G125700 Sobic002G125700 Sobic007G141500--Sobic002G125700 Sobic004G166700 Sobic004G166700 Sobic007G141500--Sobic004G166700 Sobic001G444400 Sobic001G444400 Sobic007G141500--Sobic001G444400 Sobic007G141500--Sobic001G325400 Sobic010G052700 Sobic010G052700 Sobic007G141500--Sobic010G052700 Sobic006G153100--Sobic001G444400 Sobic006G153100--Sobic007G141500 Sobic006G153100--Sobic003G117600 Sobic006G153100--Sobic002G416600 Sobic010G084400 Sobic010G084400 Sobic006G153100--Sobic010G084400 Sobic005G179200 Sobic005G179200 Sobic006G153100--Sobic005G179200 Sobic003G252800 Sobic003G252800 Sobic006G153100--Sobic003G252800 Sobic002G199650 Sobic002G199650 Sobic006G153100--Sobic002G199650 Sobic009G196400 Sobic009G196400 Sobic006G153100--Sobic009G196400 Sobic003G280200--Sobic003G417700 Sobic003G280200--Sobic002G415100 Sobic003G280200--Sobic009G139400 Sobic003G280200--Sobic003G297600 Sobic003G280200--Sobic009G077800 Sobic003G280200--Sobic005G029200 Sobic003G364000 Sobic003G364000 Sobic003G280200--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G280200--Sobic002G004900 Sobic002G034800 Sobic002G034800 Sobic003G280200--Sobic002G034800 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic001G325400--Sobic007G087200 Sobic001G325400--Sobic003G117600 Sobic001G070800--Sobic003G297600 Sobic001G070800--Sobic009G077800 Sobic001G070800--Sobic003G393700 Sobic001G070800--Sobic002G416600 Sobic001G070800--Sobic009G139400 Sobic001G177800 Sobic001G177800 Sobic001G070800--Sobic001G177800 Sobic001G070800--Sobic001G317200 Sobic006G099900 Sobic006G099900 Sobic001G070800--Sobic006G099900 Sobic001G252300 Sobic001G252300 Sobic001G070800--Sobic001G252300 Sobic010G239300 Sobic010G239300 Sobic002G415100--Sobic010G239300 Sobic002G415100--Sobic003G280200 Sobic002G415100--Sobic009G128700 Sobic002G415100--Sobic001G317200 Sobic002G415100--Sobic003G297600 Sobic002G415100--Sobic010G213700 Sobic002G415100--Sobic002G034800 Sobic002G415100--Sobic009G231000 Sobic003G156200 Sobic003G156200 Sobic002G415100--Sobic003G156200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.