Gene annotation
Transcriptome id Sobic.010G072100.1
Synonym SbCAD4-2;SbCAD4-2, ATCAD1, CAD1, Sb10g006300
Functional annotation Cinnamyl alcohol dehydrogenase (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
dehydrogenase, putative, expressed
UniProt C5Z5Y7
Pfam PF08240 PF00107
Panther DB PTHR11695:SF506 PTHR11695
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0008270; zinc ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G72680 : cinnamyl-alcohol dehydrogenase
RAP-DB (Rice) LOC_Os10g11810.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a049694
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G280100 expressed protein -
2 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
4 Sobic.010G102200 expressed protein -
5 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
6 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
8 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.004G148200 Cupin domain containing protein, expressed -
10 Sobic.005G069700 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.005G101700 dirigent, putative, expressed -
12 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
15 Sobic.010G213700 GDU1, putative, expressed -
16 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
17 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G088551 - -
19 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
20 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -


Gene co-expression network
sample Sobic010G072100 Sobic010G072100 Sobic003G280100 Sobic003G280100 Sobic010G072100--Sobic003G280100 Sobic003G426000 Sobic003G426000 Sobic010G072100--Sobic003G426000 Sobic003G437100 Sobic003G437100 Sobic010G072100--Sobic003G437100 Sobic010G102200 Sobic010G102200 Sobic010G072100--Sobic010G102200 Sobic009G128700 Sobic009G128700 Sobic010G072100--Sobic009G128700 Sobic003G426300 Sobic003G426300 Sobic010G072100--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic010G072100--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic010G072100--Sobic007G067600 Sobic004G148200 Sobic004G148200 Sobic010G072100--Sobic004G148200 Sobic003G280100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G280100--Sobic005G029200 Sobic003G280100--Sobic010G072100 Sobic003G280100--Sobic003G437100 Sobic003G417700 Sobic003G417700 Sobic003G280100--Sobic003G417700 Sobic010G213700 Sobic010G213700 Sobic003G280100--Sobic010G213700 Sobic003G280100--Sobic009G128700 Sobic003G280100--Sobic003G426300 Sobic007G227300 Sobic007G227300 Sobic003G280100--Sobic007G227300 Sobic002G195400 Sobic002G195400 Sobic003G426000--Sobic002G195400 Sobic003G426000--Sobic009G128700 Sobic003G426000--Sobic007G067600 Sobic004G304300 Sobic004G304300 Sobic003G426000--Sobic004G304300 Sobic003G430600 Sobic003G430600 Sobic003G426000--Sobic003G430600 Sobic003G426000--Sobic003G426300 Sobic003G426000--Sobic005G101800 Sobic001G319700 Sobic001G319700 Sobic003G426000--Sobic001G319700 Sobic003G200700 Sobic003G200700 Sobic003G426000--Sobic003G200700 Sobic003G437100--Sobic003G280100 Sobic005G206601 Sobic005G206601 Sobic003G437100--Sobic005G206601 Sobic003G437100--Sobic007G227300 Sobic003G437100--Sobic005G101800 Sobic003G437100--Sobic003G426300 Sobic003G437100--Sobic007G067600 Sobic005G101700 Sobic005G101700 Sobic003G437100--Sobic005G101700 Sobic010G084400 Sobic010G084400 Sobic003G437100--Sobic010G084400 Sobic002G247600 Sobic002G247600 Sobic003G437100--Sobic002G247600 Sobic010G102200--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic010G102200--Sobic007G015800 Sobic010G102200--Sobic003G426000 Sobic010G102300 Sobic010G102300 Sobic010G102200--Sobic010G102300 Sobic010G102200--Sobic010G072100 Sobic008G164201 Sobic008G164201 Sobic010G102200--Sobic008G164201 Sobic010G102200--Sobic002G195400 Sobic010G102200--Sobic004G304300 Sobic004G180301 Sobic004G180301 Sobic010G102200--Sobic004G180301 Sobic009G128700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic009G128700--Sobic003G252800 Sobic009G128700--Sobic003G426300 Sobic009G128700--Sobic005G101800 Sobic010G239300 Sobic010G239300 Sobic009G128700--Sobic010G239300 Sobic002G415100 Sobic002G415100 Sobic009G128700--Sobic002G415100 Sobic009G128700--Sobic003G426000 Sobic006G099900 Sobic006G099900 Sobic009G128700--Sobic006G099900 Sobic003G280200 Sobic003G280200 Sobic009G128700--Sobic003G280200 Sobic003G426300--Sobic005G101800 Sobic003G426300--Sobic009G128700 Sobic003G426300--Sobic010G084400 Sobic003G426300--Sobic003G426000 Sobic003G426300--Sobic003G252800 Sobic001G063000 Sobic001G063000 Sobic003G426300--Sobic001G063000 Sobic010G117900 Sobic010G117900 Sobic003G426300--Sobic010G117900 Sobic003G426300--Sobic007G227300 Sobic001G400800 Sobic001G400800 Sobic003G426300--Sobic001G400800 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic001G317200 Sobic001G317200 Sobic005G101800--Sobic001G317200 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic005G101800--Sobic009G128700 Sobic005G101800--Sobic001G400800 Sobic007G067600--Sobic002G195400 Sobic007G066932 Sobic007G066932 Sobic007G067600--Sobic007G066932 Sobic007G067600--Sobic001G319700 Sobic007G067600--Sobic010G102300 Sobic007G067600--Sobic005G101800 Sobic007G067600--Sobic010G117900 Sobic007G067600--Sobic003G430600 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic004G148200--Sobic005G029200 Sobic002G055700 Sobic002G055700 Sobic004G148200--Sobic002G055700 Sobic004G189500 Sobic004G189500 Sobic004G148200--Sobic004G189500 Sobic004G148200--Sobic007G227300 Sobic004G189400 Sobic004G189400 Sobic004G148200--Sobic004G189400 Sobic003G303100 Sobic003G303100 Sobic004G148200--Sobic003G303100 Sobic006G268800 Sobic006G268800 Sobic004G148200--Sobic006G268800 Sobic009G145500 Sobic009G145500 Sobic004G148200--Sobic009G145500 Sobic004G148200--Sobic003G200700
Octagon: transcription factors


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