Gene annotation
Transcriptome id Sobic.010G102200.1
Synonym
Functional annotation expressed protein
UniProt C5Z7W6
Pfam -
Panther DB PTHR35547 PTHR35547:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g13910.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.007G015800 - -
3 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.010G102300 expressed protein -
5 Sobic.010G072100 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.008G164201 - -
7 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
8 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.004G180301 - -
10 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
11 Sobic.001G495148 - -
12 Sobic.010G035700 expressed protein -
13 Sobic.002G024650 - -
14 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.005G170150 - -
16 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
17 Sobic.007G066932 - -
18 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G495164 - -
20 Sobic.005G045500 carrier, putative, expressed -


Gene co-expression network
sample Sobic010G102200 Sobic010G102200 Sobic001G319700 Sobic001G319700 Sobic010G102200--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic010G102200--Sobic007G015800 Sobic003G426000 Sobic003G426000 Sobic010G102200--Sobic003G426000 Sobic010G102300 Sobic010G102300 Sobic010G102200--Sobic010G102300 Sobic010G072100 Sobic010G072100 Sobic010G102200--Sobic010G072100 Sobic008G164201 Sobic008G164201 Sobic010G102200--Sobic008G164201 Sobic002G195400 Sobic002G195400 Sobic010G102200--Sobic002G195400 Sobic004G304300 Sobic004G304300 Sobic010G102200--Sobic004G304300 Sobic004G180301 Sobic004G180301 Sobic010G102200--Sobic004G180301 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic007G067600 Sobic007G067600 Sobic001G319700--Sobic007G067600 Sobic003G426100 Sobic003G426100 Sobic001G319700--Sobic003G426100 Sobic007G066932 Sobic007G066932 Sobic001G319700--Sobic007G066932 Sobic010G035700 Sobic010G035700 Sobic001G319700--Sobic010G035700 Sobic007G067350 Sobic007G067350 Sobic001G319700--Sobic007G067350 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic002G024650 Sobic002G024650 Sobic007G015800--Sobic002G024650 Sobic001G121850 Sobic001G121850 Sobic007G015800--Sobic001G121850 Sobic003G426000--Sobic002G195400 Sobic009G128700 Sobic009G128700 Sobic003G426000--Sobic009G128700 Sobic003G426000--Sobic007G067600 Sobic003G426000--Sobic004G304300 Sobic003G430600 Sobic003G430600 Sobic003G426000--Sobic003G430600 Sobic003G426300 Sobic003G426300 Sobic003G426000--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic003G426000--Sobic005G101800 Sobic003G426000--Sobic001G319700 Sobic003G200700 Sobic003G200700 Sobic003G426000--Sobic003G200700 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600 Sobic003G280100 Sobic003G280100 Sobic010G072100--Sobic003G280100 Sobic010G072100--Sobic003G426000 Sobic003G437100 Sobic003G437100 Sobic010G072100--Sobic003G437100 Sobic010G072100--Sobic010G102200 Sobic010G072100--Sobic009G128700 Sobic010G072100--Sobic003G426300 Sobic010G072100--Sobic005G101800 Sobic010G072100--Sobic007G067600 Sobic004G148200 Sobic004G148200 Sobic010G072100--Sobic004G148200 Sobic008G164201--Sobic010G102200 Sobic001G401000 Sobic001G401000 Sobic008G164201--Sobic001G401000 Sobic005G033900 Sobic005G033900 Sobic008G164201--Sobic005G033900 Sobic008G164201--Sobic003G426000 Sobic003G417700 Sobic003G417700 Sobic008G164201--Sobic003G417700 Sobic008G164201--Sobic003G200700 Sobic005G224000 Sobic005G224000 Sobic008G164201--Sobic005G224000 Sobic010G042500 Sobic010G042500 Sobic008G164201--Sobic010G042500 Sobic003G156200 Sobic003G156200 Sobic008G164201--Sobic003G156200 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic002G195400--Sobic003G426000 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic002G195400--Sobic004G304300 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic004G304300--Sobic005G101800 Sobic004G304300--Sobic009G128700 Sobic004G180301--Sobic010G035700 Sobic004G180301--Sobic003G426100 Sobic004G180301--Sobic004G304300 Sobic004G180301--Sobic007G015800 Sobic004G180301--Sobic010G102300 Sobic004G180301--Sobic001G319700 Sobic004G180301--Sobic007G066932 Sobic004G180301--Sobic010G102200 Sobic004G180301--Sobic002G195400
Octagon: transcription factors


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