Gene annotation
Transcriptome id Sobic.008G164201.1
Synonym -
Functional annotation -
UniProt A0A1Z5R734
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G102200 expressed protein -
2 Sobic.001G401000 pathogenesis-related Bet v I family protein, putative, expressed -
3 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
6 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
7 Sobic.005G224000 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.010G042500 expressed protein -
9 Sobic.003G156200 cytochrome P450, putative, expressed -
10 Sobic.003G265000 expressed protein -
11 Sobic.004G112300 - -
12 Sobic.006G268800 transporter family protein, putative, expressed -
13 Sobic.005G110454 - -
14 Sobic.006G235000 expressed protein -
15 Sobic.005G071100 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
16 Sobic.001G195300 cytochrome P450, putative, expressed -
17 Sobic.005G110451 - -
18 Sobic.010G211900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.010G062300 plant protein of unknown function domain containing protein, expressed -
20 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic008G164201 Sobic008G164201 Sobic010G102200 Sobic010G102200 Sobic008G164201--Sobic010G102200 Sobic001G401000 Sobic001G401000 Sobic008G164201--Sobic001G401000 Sobic005G033900 Sobic005G033900 Sobic008G164201--Sobic005G033900 Sobic003G426000 Sobic003G426000 Sobic008G164201--Sobic003G426000 Sobic003G417700 Sobic003G417700 Sobic008G164201--Sobic003G417700 Sobic003G200700 Sobic003G200700 Sobic008G164201--Sobic003G200700 Sobic005G224000 Sobic005G224000 Sobic008G164201--Sobic005G224000 Sobic010G042500 Sobic010G042500 Sobic008G164201--Sobic010G042500 Sobic003G156200 Sobic003G156200 Sobic008G164201--Sobic003G156200 Sobic001G319700 Sobic001G319700 Sobic010G102200--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic010G102200--Sobic007G015800 Sobic010G102200--Sobic003G426000 Sobic010G102300 Sobic010G102300 Sobic010G102200--Sobic010G102300 Sobic010G072100 Sobic010G072100 Sobic010G102200--Sobic010G072100 Sobic010G102200--Sobic008G164201 Sobic002G195400 Sobic002G195400 Sobic010G102200--Sobic002G195400 Sobic004G304300 Sobic004G304300 Sobic010G102200--Sobic004G304300 Sobic004G180301 Sobic004G180301 Sobic010G102200--Sobic004G180301 Sobic001G401000--Sobic005G224000 Sobic005G110454 Sobic005G110454 Sobic001G401000--Sobic005G110454 Sobic005G110451 Sobic005G110451 Sobic001G401000--Sobic005G110451 Sobic001G195300 Sobic001G195300 Sobic001G401000--Sobic001G195300 Sobic001G401000--Sobic008G164201 Sobic001G400900 Sobic001G400900 Sobic001G401000--Sobic001G400900 Sobic005G071100 Sobic005G071100 Sobic001G401000--Sobic005G071100 Sobic001G401000--Sobic003G417700 Sobic001G401000--Sobic003G156200 Sobic010G211900 Sobic010G211900 Sobic005G033900--Sobic010G211900 Sobic003G176350 Sobic003G176350 Sobic005G033900--Sobic003G176350 Sobic005G051500 Sobic005G051500 Sobic005G033900--Sobic005G051500 Sobic003G301600 Sobic003G301600 Sobic005G033900--Sobic003G301600 Sobic006G268800 Sobic006G268800 Sobic005G033900--Sobic006G268800 Sobic010G259500 Sobic010G259500 Sobic005G033900--Sobic010G259500 Sobic001G402200 Sobic001G402200 Sobic005G033900--Sobic001G402200 Sobic010G084300 Sobic010G084300 Sobic005G033900--Sobic010G084300 Sobic005G033900--Sobic003G200700 Sobic003G426000--Sobic002G195400 Sobic009G128700 Sobic009G128700 Sobic003G426000--Sobic009G128700 Sobic007G067600 Sobic007G067600 Sobic003G426000--Sobic007G067600 Sobic003G426000--Sobic004G304300 Sobic003G430600 Sobic003G430600 Sobic003G426000--Sobic003G430600 Sobic003G426300 Sobic003G426300 Sobic003G426000--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic003G426000--Sobic005G101800 Sobic003G426000--Sobic001G319700 Sobic003G426000--Sobic003G200700 Sobic003G280200 Sobic003G280200 Sobic003G417700--Sobic003G280200 Sobic003G417700--Sobic003G156200 Sobic004G148200 Sobic004G148200 Sobic003G417700--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G417700--Sobic005G029200 Sobic003G417700--Sobic009G128700 Sobic003G280100 Sobic003G280100 Sobic003G417700--Sobic003G280100 Sobic010G213700 Sobic010G213700 Sobic003G417700--Sobic010G213700 Sobic003G417700--Sobic003G426000 Sobic008G158100 Sobic008G158100 Sobic003G417700--Sobic008G158100 Sobic007G227300 Sobic007G227300 Sobic003G200700--Sobic007G227300 Sobic003G200700--Sobic006G268800 Sobic003G200700--Sobic010G211900 Sobic003G200700--Sobic004G148200 Sobic003G264400 Sobic003G264400 Sobic003G200700--Sobic003G264400 Sobic006G099900 Sobic006G099900 Sobic003G200700--Sobic006G099900 Sobic001G231400 Sobic001G231400 Sobic003G200700--Sobic001G231400 Sobic003G200700--Sobic005G101800 Sobic004G243100 Sobic004G243100 Sobic003G200700--Sobic004G243100 Sobic005G224000--Sobic001G401000 Sobic005G224000--Sobic005G110454 Sobic005G224000--Sobic005G110451 Sobic005G224000--Sobic003G417700 Sobic005G224000--Sobic001G195300 Sobic005G224000--Sobic008G158100 Sobic005G224000--Sobic005G071100 Sobic010G211600 Sobic010G211600 Sobic005G224000--Sobic010G211600 Sobic005G224000--Sobic003G156200 Sobic010G042500--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic010G042500--Sobic001G018300 Sobic010G042500--Sobic001G402200 Sobic010G042500--Sobic010G211900 Sobic007G155100 Sobic007G155100 Sobic010G042500--Sobic007G155100 Sobic010G042500--Sobic001G231400 Sobic010G042500--Sobic003G200700 Sobic002G139400 Sobic002G139400 Sobic010G042500--Sobic002G139400 Sobic009G224100 Sobic009G224100 Sobic010G042500--Sobic009G224100 Sobic002G203700 Sobic002G203700 Sobic003G156200--Sobic002G203700 Sobic003G156200--Sobic003G417700 Sobic004G313100 Sobic004G313100 Sobic003G156200--Sobic004G313100 Sobic003G156200--Sobic003G280200 Sobic002G415100 Sobic002G415100 Sobic003G156200--Sobic002G415100 Sobic003G156200--Sobic003G301600 Sobic003G156200--Sobic010G213700 Sobic003G156200--Sobic005G029200 Sobic003G156200--Sobic004G148200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.