Gene annotation
Transcriptome id Sobic.001G401000.1
Synonym PYL12, RCAR6
Functional annotation pathogenesis-related Bet v I family protein, putative, expressed
UniProt Q4VQB3
Pfam PF00407
Panther DB PTHR31213 PTHR31213:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009607; response to biotic stimulus GO:0006952defense response


Orthologs (automatic annotation)
TAIR AT5G45870 : PYR1-like 12
RAP-DB (Rice) LOC_Os03g18850.1 : pathogenesis-related Bet v I family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002072 , Zm00025a002073 , Zm00025a002074
Brachypodium KQK22066
Barley HORVU4Hr1G054870.3 , HORVU4Hr1G054870.6 , HORVU4Hr1G054870.7 , HORVU4Hr1G054870.4 , HORVU4Hr1G054870.5
Wheat TraesCS4A02G116400 , TraesCS2B02G442700 , TraesCS2D02G317800 , TraesCS2B02G500200 , TraesCS4B02G187800 , TraesCS2A02G423300 , TraesCS7D02G164500 , TraesCS2B02G500100 , TraesCS4D02G189200 , TraesCS4D02G189200 , TraesCS7A02G162600 , TraesCS2D02G420900 , TraesCS1B02G115600 , TraesCS2B02G500300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G224000 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
2 Sobic.005G110454 - -
3 Sobic.005G110451 - -
4 Sobic.001G195300 cytochrome P450, putative, expressed -
5 Sobic.008G164201 - -
6 Sobic.001G400900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
7 Sobic.005G071100 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
8 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
9 Sobic.003G156200 cytochrome P450, putative, expressed -
10 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.009G144800 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
13 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
14 Sobic.009G141000 KH domain containing protein, putative, expressed K14945: protein quaking
15 Sobic.002G139300 AP2 domain containing protein, expressed -
16 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G114900 - -
19 Sobic.005G051500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.010G102200 expressed protein -


Gene co-expression network
sample Sobic001G401000 Sobic001G401000 Sobic005G224000 Sobic005G224000 Sobic001G401000--Sobic005G224000 Sobic005G110454 Sobic005G110454 Sobic001G401000--Sobic005G110454 Sobic005G110451 Sobic005G110451 Sobic001G401000--Sobic005G110451 Sobic001G195300 Sobic001G195300 Sobic001G401000--Sobic001G195300 Sobic008G164201 Sobic008G164201 Sobic001G401000--Sobic008G164201 Sobic001G400900 Sobic001G400900 Sobic001G401000--Sobic001G400900 Sobic005G071100 Sobic005G071100 Sobic001G401000--Sobic005G071100 Sobic003G417700 Sobic003G417700 Sobic001G401000--Sobic003G417700 Sobic003G156200 Sobic003G156200 Sobic001G401000--Sobic003G156200 Sobic005G224000--Sobic001G401000 Sobic005G224000--Sobic005G110454 Sobic005G224000--Sobic005G110451 Sobic005G224000--Sobic003G417700 Sobic005G224000--Sobic001G195300 Sobic008G158100 Sobic008G158100 Sobic005G224000--Sobic008G158100 Sobic005G224000--Sobic005G071100 Sobic010G211600 Sobic010G211600 Sobic005G224000--Sobic010G211600 Sobic005G224000--Sobic003G156200 Sobic005G110454--Sobic005G110451 Sobic005G110454--Sobic001G195300 Sobic002G010900 Sobic002G010900 Sobic005G110454--Sobic002G010900 Sobic005G110454--Sobic001G401000 Sobic001G114900 Sobic001G114900 Sobic005G110454--Sobic001G114900 Sobic005G110454--Sobic005G224000 Sobic009G144800 Sobic009G144800 Sobic005G110454--Sobic009G144800 Sobic005G110454--Sobic010G211600 Sobic008G158332 Sobic008G158332 Sobic005G110454--Sobic008G158332 Sobic005G110451--Sobic005G110454 Sobic005G110451--Sobic001G195300 Sobic005G110451--Sobic002G010900 Sobic005G110451--Sobic001G401000 Sobic005G110451--Sobic001G114900 Sobic005G110451--Sobic005G224000 Sobic005G110451--Sobic010G211600 Sobic005G110451--Sobic009G144800 Sobic005G110451--Sobic008G158332 Sobic001G195300--Sobic005G110454 Sobic001G195300--Sobic005G110451 Sobic001G195300--Sobic001G401000 Sobic001G195300--Sobic005G224000 Sobic001G195300--Sobic005G071100 Sobic001G195300--Sobic009G144800 Sobic001G195300--Sobic008G158100 Sobic001G195300--Sobic002G010900 Sobic001G195300--Sobic003G417700 Sobic010G102200 Sobic010G102200 Sobic008G164201--Sobic010G102200 Sobic008G164201--Sobic001G401000 Sobic005G033900 Sobic005G033900 Sobic008G164201--Sobic005G033900 Sobic003G426000 Sobic003G426000 Sobic008G164201--Sobic003G426000 Sobic008G164201--Sobic003G417700 Sobic003G200700 Sobic003G200700 Sobic008G164201--Sobic003G200700 Sobic008G164201--Sobic005G224000 Sobic010G042500 Sobic010G042500 Sobic008G164201--Sobic010G042500 Sobic008G164201--Sobic003G156200 Sobic001G400900--Sobic003G156200 Sobic002G415100 Sobic002G415100 Sobic001G400900--Sobic002G415100 Sobic001G400900--Sobic001G401000 Sobic002G203700 Sobic002G203700 Sobic001G400900--Sobic002G203700 Sobic005G183100 Sobic005G183100 Sobic001G400900--Sobic005G183100 Sobic001G400900--Sobic003G417700 Sobic004G313100 Sobic004G313100 Sobic001G400900--Sobic004G313100 Sobic010G239300 Sobic010G239300 Sobic001G400900--Sobic010G239300 Sobic003G280200 Sobic003G280200 Sobic001G400900--Sobic003G280200 Sobic005G071100--Sobic005G224000 Sobic003G301600 Sobic003G301600 Sobic005G071100--Sobic003G301600 Sobic005G071100--Sobic001G401000 Sobic009G141000 Sobic009G141000 Sobic005G071100--Sobic009G141000 Sobic005G071100--Sobic001G195300 Sobic005G071100--Sobic003G156200 Sobic005G071100--Sobic005G110451 Sobic005G071100--Sobic005G110454 Sobic005G071100--Sobic008G164201 Sobic003G417700--Sobic003G280200 Sobic003G417700--Sobic003G156200 Sobic004G148200 Sobic004G148200 Sobic003G417700--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G417700--Sobic005G029200 Sobic009G128700 Sobic009G128700 Sobic003G417700--Sobic009G128700 Sobic003G280100 Sobic003G280100 Sobic003G417700--Sobic003G280100 Sobic010G213700 Sobic010G213700 Sobic003G417700--Sobic010G213700 Sobic003G417700--Sobic003G426000 Sobic003G417700--Sobic008G158100 Sobic003G156200--Sobic002G203700 Sobic003G156200--Sobic003G417700 Sobic003G156200--Sobic004G313100 Sobic003G156200--Sobic003G280200 Sobic003G156200--Sobic002G415100 Sobic003G156200--Sobic003G301600 Sobic003G156200--Sobic010G213700 Sobic003G156200--Sobic005G029200 Sobic003G156200--Sobic004G148200
Octagon: transcription factors


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