Gene annotation
Transcriptome id Sobic.001G400900.1
Synonym Sb01g037940, PYL6, RCAR9,
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pathogenesis-related Bet v I family protein, putative, expressed
UniProt C5WMM0
Pfam PF00407
Panther DB PTHR31213 PTHR31213:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009607; response to biotic stimulus GO:0006952defense response


Orthologs (automatic annotation)
TAIR AT2G40330 : PYR1-like 6
RAP-DB (Rice) LOC_Os03g18850.1 : pathogenesis-related Bet v I family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002072 , Zm00025a002073 , Zm00025a002074
Brachypodium KQK22066
Barley HORVU4Hr1G054870.3 , HORVU4Hr1G054870.6 , HORVU4Hr1G054870.7 , HORVU4Hr1G054870.4 , HORVU4Hr1G054870.5
Wheat TraesCS4A02G116400 , TraesCS2B02G442700 , TraesCS2D02G317800 , TraesCS2B02G500200 , TraesCS2A02G423300 , TraesCS7D02G164500 , TraesCS2B02G500100 , TraesCS4D02G189200 , TraesCS4D02G189200 , TraesCS7A02G162600 , TraesCS2D02G420900 , TraesCS4B02G187800 , TraesCS2B02G500300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G156200 cytochrome P450, putative, expressed -
2 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.001G401000 pathogenesis-related Bet v I family protein, putative, expressed -
4 Sobic.002G203700 hypothetical protein -
5 Sobic.005G183100 sulfotransferase domain containing protein, expressed -
6 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.004G313100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
8 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
9 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G213700 GDU1, putative, expressed -
12 Sobic.009G144900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
14 Sobic.010G072100 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
15 Sobic.005G224000 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
16 Sobic.009G153100 zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
17 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
18 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
19 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic001G400900 Sobic001G400900 Sobic003G156200 Sobic003G156200 Sobic001G400900--Sobic003G156200 Sobic002G415100 Sobic002G415100 Sobic001G400900--Sobic002G415100 Sobic001G401000 Sobic001G401000 Sobic001G400900--Sobic001G401000 Sobic002G203700 Sobic002G203700 Sobic001G400900--Sobic002G203700 Sobic005G183100 Sobic005G183100 Sobic001G400900--Sobic005G183100 Sobic003G417700 Sobic003G417700 Sobic001G400900--Sobic003G417700 Sobic004G313100 Sobic004G313100 Sobic001G400900--Sobic004G313100 Sobic010G239300 Sobic010G239300 Sobic001G400900--Sobic010G239300 Sobic003G280200 Sobic003G280200 Sobic001G400900--Sobic003G280200 Sobic003G156200--Sobic002G203700 Sobic003G156200--Sobic003G417700 Sobic003G156200--Sobic004G313100 Sobic003G156200--Sobic003G280200 Sobic003G156200--Sobic002G415100 Sobic003G301600 Sobic003G301600 Sobic003G156200--Sobic003G301600 Sobic010G213700 Sobic010G213700 Sobic003G156200--Sobic010G213700 Sobic005G029200 Sobic005G029200 Sobic003G156200--Sobic005G029200 Sobic004G148200 Sobic004G148200 Sobic003G156200--Sobic004G148200 Sobic002G415100--Sobic010G239300 Sobic002G415100--Sobic003G280200 Sobic009G128700 Sobic009G128700 Sobic002G415100--Sobic009G128700 Sobic001G317200 Sobic001G317200 Sobic002G415100--Sobic001G317200 Sobic003G297600 Sobic003G297600 Sobic002G415100--Sobic003G297600 Sobic002G415100--Sobic010G213700 Sobic002G034800 Sobic002G034800 Sobic002G415100--Sobic002G034800 Sobic009G231000 Sobic009G231000 Sobic002G415100--Sobic009G231000 Sobic002G415100--Sobic003G156200 Sobic005G224000 Sobic005G224000 Sobic001G401000--Sobic005G224000 Sobic005G110454 Sobic005G110454 Sobic001G401000--Sobic005G110454 Sobic005G110451 Sobic005G110451 Sobic001G401000--Sobic005G110451 Sobic001G195300 Sobic001G195300 Sobic001G401000--Sobic001G195300 Sobic008G164201 Sobic008G164201 Sobic001G401000--Sobic008G164201 Sobic001G401000--Sobic001G400900 Sobic005G071100 Sobic005G071100 Sobic001G401000--Sobic005G071100 Sobic001G401000--Sobic003G417700 Sobic001G401000--Sobic003G156200 Sobic002G203700--Sobic003G156200 Sobic002G203700--Sobic003G301600 Sobic002G203700--Sobic004G313100 Sobic002G203700--Sobic005G183100 Sobic002G057900 Sobic002G057900 Sobic002G203700--Sobic002G057900 Sobic001G317000 Sobic001G317000 Sobic002G203700--Sobic001G317000 Sobic002G203700--Sobic002G034800 Sobic002G329800 Sobic002G329800 Sobic002G203700--Sobic002G329800 Sobic002G203700--Sobic010G213700 Sobic002G366600 Sobic002G366600 Sobic005G183100--Sobic002G366600 Sobic005G183100--Sobic002G415100 Sobic003G255200 Sobic003G255200 Sobic005G183100--Sobic003G255200 Sobic007G025500 Sobic007G025500 Sobic005G183100--Sobic007G025500 Sobic005G183100--Sobic009G231000 Sobic004G046200 Sobic004G046200 Sobic005G183100--Sobic004G046200 Sobic003G062600 Sobic003G062600 Sobic005G183100--Sobic003G062600 Sobic010G259600 Sobic010G259600 Sobic005G183100--Sobic010G259600 Sobic005G183100--Sobic010G213700 Sobic003G417700--Sobic003G280200 Sobic003G417700--Sobic003G156200 Sobic003G417700--Sobic004G148200 Sobic003G417700--Sobic005G029200 Sobic003G417700--Sobic009G128700 Sobic003G280100 Sobic003G280100 Sobic003G417700--Sobic003G280100 Sobic003G417700--Sobic010G213700 Sobic003G426000 Sobic003G426000 Sobic003G417700--Sobic003G426000 Sobic008G158100 Sobic008G158100 Sobic003G417700--Sobic008G158100 Sobic004G313100--Sobic003G156200 Sobic004G313100--Sobic002G203700 Sobic004G189500 Sobic004G189500 Sobic004G313100--Sobic004G189500 Sobic005G196800 Sobic005G196800 Sobic004G313100--Sobic005G196800 Sobic003G322900 Sobic003G322900 Sobic004G313100--Sobic003G322900 Sobic004G321300 Sobic004G321300 Sobic004G313100--Sobic004G321300 Sobic003G382600 Sobic003G382600 Sobic004G313100--Sobic003G382600 Sobic002G055600 Sobic002G055600 Sobic004G313100--Sobic002G055600 Sobic001G038900 Sobic001G038900 Sobic004G313100--Sobic001G038900 Sobic010G239300--Sobic002G415100 Sobic010G239300--Sobic001G317200 Sobic010G239300--Sobic009G128700 Sobic010G084400 Sobic010G084400 Sobic010G239300--Sobic010G084400 Sobic002G416600 Sobic002G416600 Sobic010G239300--Sobic002G416600 Sobic003G087300 Sobic003G087300 Sobic010G239300--Sobic003G087300 Sobic007G145600 Sobic007G145600 Sobic010G239300--Sobic007G145600 Sobic006G099900 Sobic006G099900 Sobic010G239300--Sobic006G099900 Sobic005G101800 Sobic005G101800 Sobic010G239300--Sobic005G101800 Sobic003G280200--Sobic003G417700 Sobic003G280200--Sobic002G415100 Sobic009G139400 Sobic009G139400 Sobic003G280200--Sobic009G139400 Sobic003G280200--Sobic003G297600 Sobic009G077800 Sobic009G077800 Sobic003G280200--Sobic009G077800 Sobic003G280200--Sobic005G029200 Sobic003G364000 Sobic003G364000 Sobic003G280200--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G280200--Sobic002G004900 Sobic003G280200--Sobic002G034800
Octagon: transcription factors


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