Gene annotation
Transcriptome id Sobic.005G224000.1
Synonym Sb05g027300
Functional annotation stripe rust resistance protein Yr10, putative, expressed
UniProt C5Y8G1
Pfam PF13401
Panther DB PTHR23155 PTHR23155:SF484
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g37880.1 : stripe rust resistance protein Yr10, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G401000 pathogenesis-related Bet v I family protein, putative, expressed -
2 Sobic.005G110454 - -
3 Sobic.005G110451 - -
4 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
5 Sobic.001G195300 cytochrome P450, putative, expressed -
6 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.005G071100 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
8 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
9 Sobic.003G156200 cytochrome P450, putative, expressed -
10 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
11 Sobic.002G139300 AP2 domain containing protein, expressed -
12 Sobic.009G141000 KH domain containing protein, putative, expressed K14945: protein quaking
13 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
15 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.008G164201 - -
17 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
19 Sobic.006G190700 - -
20 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic005G224000 Sobic005G224000 Sobic001G401000 Sobic001G401000 Sobic005G224000--Sobic001G401000 Sobic005G110454 Sobic005G110454 Sobic005G224000--Sobic005G110454 Sobic005G110451 Sobic005G110451 Sobic005G224000--Sobic005G110451 Sobic003G417700 Sobic003G417700 Sobic005G224000--Sobic003G417700 Sobic001G195300 Sobic001G195300 Sobic005G224000--Sobic001G195300 Sobic008G158100 Sobic008G158100 Sobic005G224000--Sobic008G158100 Sobic005G071100 Sobic005G071100 Sobic005G224000--Sobic005G071100 Sobic010G211600 Sobic010G211600 Sobic005G224000--Sobic010G211600 Sobic003G156200 Sobic003G156200 Sobic005G224000--Sobic003G156200 Sobic001G401000--Sobic005G224000 Sobic001G401000--Sobic005G110454 Sobic001G401000--Sobic005G110451 Sobic001G401000--Sobic001G195300 Sobic008G164201 Sobic008G164201 Sobic001G401000--Sobic008G164201 Sobic001G400900 Sobic001G400900 Sobic001G401000--Sobic001G400900 Sobic001G401000--Sobic005G071100 Sobic001G401000--Sobic003G417700 Sobic001G401000--Sobic003G156200 Sobic005G110454--Sobic005G110451 Sobic005G110454--Sobic001G195300 Sobic002G010900 Sobic002G010900 Sobic005G110454--Sobic002G010900 Sobic005G110454--Sobic001G401000 Sobic001G114900 Sobic001G114900 Sobic005G110454--Sobic001G114900 Sobic005G110454--Sobic005G224000 Sobic009G144800 Sobic009G144800 Sobic005G110454--Sobic009G144800 Sobic005G110454--Sobic010G211600 Sobic008G158332 Sobic008G158332 Sobic005G110454--Sobic008G158332 Sobic005G110451--Sobic005G110454 Sobic005G110451--Sobic001G195300 Sobic005G110451--Sobic002G010900 Sobic005G110451--Sobic001G401000 Sobic005G110451--Sobic001G114900 Sobic005G110451--Sobic005G224000 Sobic005G110451--Sobic010G211600 Sobic005G110451--Sobic009G144800 Sobic005G110451--Sobic008G158332 Sobic003G280200 Sobic003G280200 Sobic003G417700--Sobic003G280200 Sobic003G417700--Sobic003G156200 Sobic004G148200 Sobic004G148200 Sobic003G417700--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G417700--Sobic005G029200 Sobic009G128700 Sobic009G128700 Sobic003G417700--Sobic009G128700 Sobic003G280100 Sobic003G280100 Sobic003G417700--Sobic003G280100 Sobic010G213700 Sobic010G213700 Sobic003G417700--Sobic010G213700 Sobic003G426000 Sobic003G426000 Sobic003G417700--Sobic003G426000 Sobic003G417700--Sobic008G158100 Sobic001G195300--Sobic005G110454 Sobic001G195300--Sobic005G110451 Sobic001G195300--Sobic001G401000 Sobic001G195300--Sobic005G224000 Sobic001G195300--Sobic005G071100 Sobic001G195300--Sobic009G144800 Sobic001G195300--Sobic008G158100 Sobic001G195300--Sobic002G010900 Sobic001G195300--Sobic003G417700 Sobic008G027600 Sobic008G027600 Sobic008G158100--Sobic008G027600 Sobic008G158100--Sobic004G148200 Sobic002G139300 Sobic002G139300 Sobic008G158100--Sobic002G139300 Sobic008G158100--Sobic003G417700 Sobic001G187200 Sobic001G187200 Sobic008G158100--Sobic001G187200 Sobic005G011200 Sobic005G011200 Sobic008G158100--Sobic005G011200 Sobic006G268800 Sobic006G268800 Sobic008G158100--Sobic006G268800 Sobic002G369400 Sobic002G369400 Sobic008G158100--Sobic002G369400 Sobic009G145500 Sobic009G145500 Sobic008G158100--Sobic009G145500 Sobic005G071100--Sobic005G224000 Sobic003G301600 Sobic003G301600 Sobic005G071100--Sobic003G301600 Sobic005G071100--Sobic001G401000 Sobic009G141000 Sobic009G141000 Sobic005G071100--Sobic009G141000 Sobic005G071100--Sobic001G195300 Sobic005G071100--Sobic003G156200 Sobic005G071100--Sobic005G110451 Sobic005G071100--Sobic005G110454 Sobic005G071100--Sobic008G164201 Sobic002G004900 Sobic002G004900 Sobic010G211600--Sobic002G004900 Sobic010G211600--Sobic003G280200 Sobic010G211600--Sobic008G027600 Sobic010G211600--Sobic008G158100 Sobic008G172600 Sobic008G172600 Sobic010G211600--Sobic008G172600 Sobic005G177600 Sobic005G177600 Sobic010G211600--Sobic005G177600 Sobic010G211600--Sobic003G417700 Sobic001G318500 Sobic001G318500 Sobic010G211600--Sobic001G318500 Sobic010G211600--Sobic002G139300 Sobic002G203700 Sobic002G203700 Sobic003G156200--Sobic002G203700 Sobic003G156200--Sobic003G417700 Sobic004G313100 Sobic004G313100 Sobic003G156200--Sobic004G313100 Sobic003G156200--Sobic003G280200 Sobic002G415100 Sobic002G415100 Sobic003G156200--Sobic002G415100 Sobic003G156200--Sobic003G301600 Sobic003G156200--Sobic010G213700 Sobic003G156200--Sobic005G029200 Sobic003G156200--Sobic004G148200
Octagon: transcription factors


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