Gene annotation
Transcriptome id Sobic.006G190700.1
Synonym Sb06g026400
Functional annotation -
UniProt C5YEJ2
Pfam PF09117
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006952; defense response


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium KQJ84195
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
2 Sobic.002G139300 AP2 domain containing protein, expressed -
3 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.006G214600 - -
5 Sobic.004G333150 - -
6 Sobic.001G333400 SCP-like extracellular protein, expressed -
7 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
10 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
11 Sobic.003G364950 - -
12 Sobic.002G004900 transporter family protein, putative, expressed -
13 Sobic.009G196400 expressed protein -
14 Sobic.005G224000 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
15 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.003G417700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
18 Sobic.008G172600 ATCHX, putative, expressed -
19 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -
20 Sobic.003G271500 expressed protein -


Gene co-expression network
sample Sobic006G190700 Sobic006G190700 Sobic004G240600 Sobic004G240600 Sobic006G190700--Sobic004G240600 Sobic002G139300 Sobic002G139300 Sobic006G190700--Sobic002G139300 Sobic010G052700 Sobic010G052700 Sobic006G190700--Sobic010G052700 Sobic006G214600 Sobic006G214600 Sobic006G190700--Sobic006G214600 Sobic004G333150 Sobic004G333150 Sobic006G190700--Sobic004G333150 Sobic001G333400 Sobic001G333400 Sobic006G190700--Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic006G190700--Sobic005G011200 Sobic003G280200 Sobic003G280200 Sobic006G190700--Sobic003G280200 Sobic008G158100 Sobic008G158100 Sobic006G190700--Sobic008G158100 Sobic004G240600--Sobic006G190700 Sobic004G240600--Sobic004G333150 Sobic004G240600--Sobic002G139300 Sobic009G196400 Sobic009G196400 Sobic004G240600--Sobic009G196400 Sobic004G240600--Sobic010G052700 Sobic004G240600--Sobic001G333400 Sobic004G240600--Sobic005G011200 Sobic009G106800 Sobic009G106800 Sobic004G240600--Sobic009G106800 Sobic004G240600--Sobic008G158100 Sobic002G139300--Sobic009G196400 Sobic002G139300--Sobic008G158100 Sobic002G139300--Sobic004G240600 Sobic002G139300--Sobic003G280200 Sobic001G444400 Sobic001G444400 Sobic002G139300--Sobic001G444400 Sobic002G139300--Sobic001G333400 Sobic004G189500 Sobic004G189500 Sobic002G139300--Sobic004G189500 Sobic002G139300--Sobic010G052700 Sobic004G148200 Sobic004G148200 Sobic002G139300--Sobic004G148200 Sobic001G503100 Sobic001G503100 Sobic010G052700--Sobic001G503100 Sobic003G087300 Sobic003G087300 Sobic010G052700--Sobic003G087300 Sobic010G052700--Sobic001G333400 Sobic010G052700--Sobic003G280200 Sobic007G141500 Sobic007G141500 Sobic010G052700--Sobic007G141500 Sobic010G052700--Sobic005G011200 Sobic003G364000 Sobic003G364000 Sobic010G052700--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic010G052700--Sobic002G004900 Sobic002G125700 Sobic002G125700 Sobic010G052700--Sobic002G125700 Sobic003G364950 Sobic003G364950 Sobic006G214600--Sobic003G364950 Sobic010G043900 Sobic010G043900 Sobic006G214600--Sobic010G043900 Sobic002G422300 Sobic002G422300 Sobic006G214600--Sobic002G422300 Sobic004G278400 Sobic004G278400 Sobic006G214600--Sobic004G278400 Sobic006G214600--Sobic006G190700 Sobic001G054500 Sobic001G054500 Sobic006G214600--Sobic001G054500 Sobic005G108601 Sobic005G108601 Sobic006G214600--Sobic005G108601 Sobic004G045400 Sobic004G045400 Sobic006G214600--Sobic004G045400 Sobic006G227750 Sobic006G227750 Sobic006G214600--Sobic006G227750 Sobic004G333150--Sobic004G240600 Sobic004G333150--Sobic010G052700 Sobic004G333150--Sobic003G087300 Sobic004G333150--Sobic009G106800 Sobic005G203100 Sobic005G203100 Sobic004G333150--Sobic005G203100 Sobic004G273400 Sobic004G273400 Sobic004G333150--Sobic004G273400 Sobic002G421800 Sobic002G421800 Sobic004G333150--Sobic002G421800 Sobic004G333150--Sobic009G196400 Sobic001G100700 Sobic001G100700 Sobic004G333150--Sobic001G100700 Sobic001G333400--Sobic005G011200 Sobic001G333400--Sobic010G052700 Sobic002G247600 Sobic002G247600 Sobic001G333400--Sobic002G247600 Sobic001G333400--Sobic007G141500 Sobic001G333400--Sobic001G503100 Sobic001G333400--Sobic002G004900 Sobic006G125100 Sobic006G125100 Sobic001G333400--Sobic006G125100 Sobic002G336700 Sobic002G336700 Sobic001G333400--Sobic002G336700 Sobic001G187200 Sobic001G187200 Sobic001G333400--Sobic001G187200 Sobic005G011200--Sobic001G333400 Sobic005G051500 Sobic005G051500 Sobic005G011200--Sobic005G051500 Sobic005G011200--Sobic001G187200 Sobic006G268800 Sobic006G268800 Sobic005G011200--Sobic006G268800 Sobic005G011200--Sobic002G004900 Sobic005G011200--Sobic010G052700 Sobic001G400800 Sobic001G400800 Sobic005G011200--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic005G011200--Sobic003G252800 Sobic005G011200--Sobic002G336700 Sobic003G417700 Sobic003G417700 Sobic003G280200--Sobic003G417700 Sobic002G415100 Sobic002G415100 Sobic003G280200--Sobic002G415100 Sobic009G139400 Sobic009G139400 Sobic003G280200--Sobic009G139400 Sobic003G297600 Sobic003G297600 Sobic003G280200--Sobic003G297600 Sobic009G077800 Sobic009G077800 Sobic003G280200--Sobic009G077800 Sobic005G029200 Sobic005G029200 Sobic003G280200--Sobic005G029200 Sobic003G280200--Sobic003G364000 Sobic003G280200--Sobic002G004900 Sobic002G034800 Sobic002G034800 Sobic003G280200--Sobic002G034800 Sobic008G027600 Sobic008G027600 Sobic008G158100--Sobic008G027600 Sobic008G158100--Sobic004G148200 Sobic008G158100--Sobic002G139300 Sobic008G158100--Sobic003G417700 Sobic008G158100--Sobic001G187200 Sobic008G158100--Sobic005G011200 Sobic008G158100--Sobic006G268800 Sobic002G369400 Sobic002G369400 Sobic008G158100--Sobic002G369400 Sobic009G145500 Sobic009G145500 Sobic008G158100--Sobic009G145500
Octagon: transcription factors


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