Gene annotation
Transcriptome id Sobic.009G196400.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P9D0
Pfam -
Panther DB PTHR33869 PTHR33869:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g48230.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.002G139300 AP2 domain containing protein, expressed -
3 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -
5 Sobic.001G333400 SCP-like extracellular protein, expressed -
6 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
8 Sobic.003G087300 nuclease PA3, putative, expressed -
9 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
10 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
11 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
13 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.006G068300 RCN4 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
17 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
19 Sobic.004G148100 Cupin domain containing protein, expressed -
20 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -


Gene co-expression network
sample Sobic009G196400 Sobic009G196400 Sobic001G444400 Sobic001G444400 Sobic009G196400--Sobic001G444400 Sobic002G139300 Sobic002G139300 Sobic009G196400--Sobic002G139300 Sobic006G153100 Sobic006G153100 Sobic009G196400--Sobic006G153100 Sobic002G421800 Sobic002G421800 Sobic009G196400--Sobic002G421800 Sobic001G333400 Sobic001G333400 Sobic009G196400--Sobic001G333400 Sobic009G106800 Sobic009G106800 Sobic009G196400--Sobic009G106800 Sobic004G240600 Sobic004G240600 Sobic009G196400--Sobic004G240600 Sobic003G087300 Sobic003G087300 Sobic009G196400--Sobic003G087300 Sobic007G141500 Sobic007G141500 Sobic009G196400--Sobic007G141500 Sobic001G444400--Sobic006G153100 Sobic010G084400 Sobic010G084400 Sobic001G444400--Sobic010G084400 Sobic001G444400--Sobic009G106800 Sobic001G444400--Sobic009G196400 Sobic001G444400--Sobic007G141500 Sobic003G252800 Sobic003G252800 Sobic001G444400--Sobic003G252800 Sobic004G111800 Sobic004G111800 Sobic001G444400--Sobic004G111800 Sobic001G100700 Sobic001G100700 Sobic001G444400--Sobic001G100700 Sobic003G426300 Sobic003G426300 Sobic001G444400--Sobic003G426300 Sobic002G139300--Sobic009G196400 Sobic008G158100 Sobic008G158100 Sobic002G139300--Sobic008G158100 Sobic002G139300--Sobic004G240600 Sobic003G280200 Sobic003G280200 Sobic002G139300--Sobic003G280200 Sobic002G139300--Sobic001G444400 Sobic002G139300--Sobic001G333400 Sobic004G189500 Sobic004G189500 Sobic002G139300--Sobic004G189500 Sobic010G052700 Sobic010G052700 Sobic002G139300--Sobic010G052700 Sobic004G148200 Sobic004G148200 Sobic002G139300--Sobic004G148200 Sobic006G153100--Sobic001G444400 Sobic006G153100--Sobic007G141500 Sobic003G117600 Sobic003G117600 Sobic006G153100--Sobic003G117600 Sobic002G416600 Sobic002G416600 Sobic006G153100--Sobic002G416600 Sobic006G153100--Sobic010G084400 Sobic005G179200 Sobic005G179200 Sobic006G153100--Sobic005G179200 Sobic006G153100--Sobic003G252800 Sobic002G199650 Sobic002G199650 Sobic006G153100--Sobic002G199650 Sobic006G153100--Sobic009G196400 Sobic002G421800--Sobic002G199650 Sobic002G421800--Sobic001G444400 Sobic002G421800--Sobic009G196400 Sobic002G421800--Sobic007G141500 Sobic002G421800--Sobic003G087300 Sobic002G421800--Sobic006G153100 Sobic002G421800--Sobic010G052700 Sobic002G421800--Sobic002G416600 Sobic002G421800--Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic001G333400--Sobic005G011200 Sobic001G333400--Sobic010G052700 Sobic002G247600 Sobic002G247600 Sobic001G333400--Sobic002G247600 Sobic001G333400--Sobic007G141500 Sobic001G503100 Sobic001G503100 Sobic001G333400--Sobic001G503100 Sobic002G004900 Sobic002G004900 Sobic001G333400--Sobic002G004900 Sobic006G125100 Sobic006G125100 Sobic001G333400--Sobic006G125100 Sobic002G336700 Sobic002G336700 Sobic001G333400--Sobic002G336700 Sobic001G187200 Sobic001G187200 Sobic001G333400--Sobic001G187200 Sobic009G106800--Sobic001G444400 Sobic009G106800--Sobic010G084400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic009G106800--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic009G106800--Sobic005G213200 Sobic001G243600 Sobic001G243600 Sobic009G106800--Sobic001G243600 Sobic009G106800--Sobic003G252800 Sobic009G106800--Sobic006G153100 Sobic006G190700 Sobic006G190700 Sobic004G240600--Sobic006G190700 Sobic004G333150 Sobic004G333150 Sobic004G240600--Sobic004G333150 Sobic004G240600--Sobic002G139300 Sobic004G240600--Sobic009G196400 Sobic004G240600--Sobic010G052700 Sobic004G240600--Sobic001G333400 Sobic004G240600--Sobic005G011200 Sobic004G240600--Sobic009G106800 Sobic004G240600--Sobic008G158100 Sobic003G087300--Sobic002G416600 Sobic003G087300--Sobic010G052700 Sobic010G239300 Sobic010G239300 Sobic003G087300--Sobic010G239300 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic004G166700 Sobic004G166700 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic002G125700 Sobic002G125700 Sobic003G087300--Sobic002G125700 Sobic001G252300 Sobic001G252300 Sobic003G087300--Sobic001G252300 Sobic007G141500--Sobic003G117600 Sobic007G141500--Sobic006G153100 Sobic007G141500--Sobic003G087300 Sobic007G141500--Sobic002G416600 Sobic007G141500--Sobic002G125700 Sobic007G141500--Sobic004G166700 Sobic007G141500--Sobic001G444400 Sobic001G325400 Sobic001G325400 Sobic007G141500--Sobic001G325400 Sobic007G141500--Sobic010G052700
Octagon: transcription factors


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