Gene annotation
Transcriptome id Sobic.001G333400.1
Synonym Sb01g032200
Functional annotation SCP-like extracellular protein, expressed
UniProt C5WWH7
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF195
NCBI CDD KOG3017; Defense-related protein containing SCP domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33720 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os10g11500.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a002913
Brachypodium -
Barley HORVU5Hr1G055950.2 , HORVU5Hr1G055950.1 , HORVU7Hr1G040730.2 , HORVU7Hr1G040730.1 , HORVU5Hr1G056040.1 , HORVU7Hr1G040740.4 , HORVU7Hr1G040740.5 , HORVU7Hr1G040740.2 , HORVU7Hr1G040740.3 , HORVU7Hr1G040740.1
Wheat TraesCS5B02G443000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
4 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
5 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
6 Sobic.002G004900 transporter family protein, putative, expressed -
7 Sobic.006G125100 ubiquitin family protein, putative, expressed -
8 Sobic.002G336700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
9 Sobic.001G187200 expressed protein -
10 Sobic.009G196400 expressed protein -
11 Sobic.003G007600 expressed protein -
12 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.006G268800 transporter family protein, putative, expressed -
14 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
15 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.010G185000 VQ domain containing protein, putative, expressed -
17 Sobic.003G252800 hypothetical protein -
18 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G051500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G333400 Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic001G333400--Sobic005G011200 Sobic010G052700 Sobic010G052700 Sobic001G333400--Sobic010G052700 Sobic002G247600 Sobic002G247600 Sobic001G333400--Sobic002G247600 Sobic007G141500 Sobic007G141500 Sobic001G333400--Sobic007G141500 Sobic001G503100 Sobic001G503100 Sobic001G333400--Sobic001G503100 Sobic002G004900 Sobic002G004900 Sobic001G333400--Sobic002G004900 Sobic006G125100 Sobic006G125100 Sobic001G333400--Sobic006G125100 Sobic002G336700 Sobic002G336700 Sobic001G333400--Sobic002G336700 Sobic001G187200 Sobic001G187200 Sobic001G333400--Sobic001G187200 Sobic005G011200--Sobic001G333400 Sobic005G051500 Sobic005G051500 Sobic005G011200--Sobic005G051500 Sobic005G011200--Sobic001G187200 Sobic006G268800 Sobic006G268800 Sobic005G011200--Sobic006G268800 Sobic005G011200--Sobic002G004900 Sobic005G011200--Sobic010G052700 Sobic001G400800 Sobic001G400800 Sobic005G011200--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic005G011200--Sobic003G252800 Sobic005G011200--Sobic002G336700 Sobic010G052700--Sobic001G503100 Sobic003G087300 Sobic003G087300 Sobic010G052700--Sobic003G087300 Sobic010G052700--Sobic001G333400 Sobic003G280200 Sobic003G280200 Sobic010G052700--Sobic003G280200 Sobic010G052700--Sobic007G141500 Sobic010G052700--Sobic005G011200 Sobic003G364000 Sobic003G364000 Sobic010G052700--Sobic003G364000 Sobic010G052700--Sobic002G004900 Sobic002G125700 Sobic002G125700 Sobic010G052700--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic002G247600--Sobic001G462700 Sobic010G185000 Sobic010G185000 Sobic002G247600--Sobic010G185000 Sobic009G003600 Sobic009G003600 Sobic002G247600--Sobic009G003600 Sobic004G348400 Sobic004G348400 Sobic002G247600--Sobic004G348400 Sobic001G331200 Sobic001G331200 Sobic002G247600--Sobic001G331200 Sobic002G247600--Sobic001G333400 Sobic007G151300 Sobic007G151300 Sobic002G247600--Sobic007G151300 Sobic005G206601 Sobic005G206601 Sobic002G247600--Sobic005G206601 Sobic003G117600 Sobic003G117600 Sobic002G247600--Sobic003G117600 Sobic007G141500--Sobic003G117600 Sobic006G153100 Sobic006G153100 Sobic007G141500--Sobic006G153100 Sobic007G141500--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic007G141500--Sobic002G416600 Sobic007G141500--Sobic002G125700 Sobic004G166700 Sobic004G166700 Sobic007G141500--Sobic004G166700 Sobic001G444400 Sobic001G444400 Sobic007G141500--Sobic001G444400 Sobic001G325400 Sobic001G325400 Sobic007G141500--Sobic001G325400 Sobic007G141500--Sobic010G052700 Sobic001G503100--Sobic002G125700 Sobic006G277600 Sobic006G277600 Sobic001G503100--Sobic006G277600 Sobic003G352300 Sobic003G352300 Sobic001G503100--Sobic003G352300 Sobic001G503100--Sobic006G125100 Sobic001G503100--Sobic010G052700 Sobic004G107700 Sobic004G107700 Sobic001G503100--Sobic004G107700 Sobic003G255200 Sobic003G255200 Sobic001G503100--Sobic003G255200 Sobic001G503100--Sobic002G004900 Sobic003G255500 Sobic003G255500 Sobic001G503100--Sobic003G255500 Sobic001G318500 Sobic001G318500 Sobic002G004900--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic002G004900--Sobic008G172600 Sobic002G017800 Sobic002G017800 Sobic002G004900--Sobic002G017800 Sobic002G004900--Sobic003G280200 Sobic002G004900--Sobic001G503100 Sobic002G302500 Sobic002G302500 Sobic002G004900--Sobic002G302500 Sobic009G009600 Sobic009G009600 Sobic002G004900--Sobic009G009600 Sobic002G004900--Sobic001G325400 Sobic002G004900--Sobic005G011200 Sobic006G125100--Sobic001G503100 Sobic010G063000 Sobic010G063000 Sobic006G125100--Sobic010G063000 Sobic006G125100--Sobic002G247600 Sobic006G125100--Sobic002G125700 Sobic006G125100--Sobic010G185000 Sobic006G125100--Sobic004G348400 Sobic006G125100--Sobic001G333400 Sobic006G125100--Sobic003G255500 Sobic006G125100--Sobic006G277600 Sobic003G007600 Sobic003G007600 Sobic002G336700--Sobic003G007600 Sobic006G103000 Sobic006G103000 Sobic002G336700--Sobic006G103000 Sobic002G336700--Sobic010G185000 Sobic002G336700--Sobic005G011200 Sobic006G157900 Sobic006G157900 Sobic002G336700--Sobic006G157900 Sobic002G336700--Sobic001G333400 Sobic001G231700 Sobic001G231700 Sobic002G336700--Sobic001G231700 Sobic001G402200 Sobic001G402200 Sobic002G336700--Sobic001G402200 Sobic002G336700--Sobic006G268800 Sobic001G177800 Sobic001G177800 Sobic001G187200--Sobic001G177800 Sobic001G187200--Sobic006G268800 Sobic001G187200--Sobic005G011200 Sobic001G187200--Sobic001G400800 Sobic007G227300 Sobic007G227300 Sobic001G187200--Sobic007G227300 Sobic001G187200--Sobic001G402200 Sobic003G307801 Sobic003G307801 Sobic001G187200--Sobic003G307801 Sobic004G148200 Sobic004G148200 Sobic001G187200--Sobic004G148200 Sobic007G061300 Sobic007G061300 Sobic001G187200--Sobic007G061300
Octagon: transcription factors


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