Gene annotation
Transcriptome id Sobic.004G333150.1
Synonym -
Functional annotation -
UniProt A0A1Z5RQ81
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G240600 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
2 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.003G087300 nuclease PA3, putative, expressed -
4 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
6 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
7 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -
8 Sobic.009G196400 expressed protein -
9 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
10 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
12 Sobic.006G190700 - -
13 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.003G271500 expressed protein -
15 Sobic.002G044800 SAM dependent carboxyl methyltransferase, putative, expressed -
16 Sobic.009G009600 expressed protein -
17 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
18 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
19 Sobic.002G139300 AP2 domain containing protein, expressed -
20 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic004G333150 Sobic004G333150 Sobic004G240600 Sobic004G240600 Sobic004G333150--Sobic004G240600 Sobic010G052700 Sobic010G052700 Sobic004G333150--Sobic010G052700 Sobic003G087300 Sobic003G087300 Sobic004G333150--Sobic003G087300 Sobic009G106800 Sobic009G106800 Sobic004G333150--Sobic009G106800 Sobic005G203100 Sobic005G203100 Sobic004G333150--Sobic005G203100 Sobic004G273400 Sobic004G273400 Sobic004G333150--Sobic004G273400 Sobic002G421800 Sobic002G421800 Sobic004G333150--Sobic002G421800 Sobic009G196400 Sobic009G196400 Sobic004G333150--Sobic009G196400 Sobic001G100700 Sobic001G100700 Sobic004G333150--Sobic001G100700 Sobic006G190700 Sobic006G190700 Sobic004G240600--Sobic006G190700 Sobic004G240600--Sobic004G333150 Sobic002G139300 Sobic002G139300 Sobic004G240600--Sobic002G139300 Sobic004G240600--Sobic009G196400 Sobic004G240600--Sobic010G052700 Sobic001G333400 Sobic001G333400 Sobic004G240600--Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic004G240600--Sobic005G011200 Sobic004G240600--Sobic009G106800 Sobic008G158100 Sobic008G158100 Sobic004G240600--Sobic008G158100 Sobic001G503100 Sobic001G503100 Sobic010G052700--Sobic001G503100 Sobic010G052700--Sobic003G087300 Sobic010G052700--Sobic001G333400 Sobic003G280200 Sobic003G280200 Sobic010G052700--Sobic003G280200 Sobic007G141500 Sobic007G141500 Sobic010G052700--Sobic007G141500 Sobic010G052700--Sobic005G011200 Sobic003G364000 Sobic003G364000 Sobic010G052700--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic010G052700--Sobic002G004900 Sobic002G125700 Sobic002G125700 Sobic010G052700--Sobic002G125700 Sobic002G416600 Sobic002G416600 Sobic003G087300--Sobic002G416600 Sobic003G087300--Sobic010G052700 Sobic010G239300 Sobic010G239300 Sobic003G087300--Sobic010G239300 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic004G166700 Sobic004G166700 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic003G087300--Sobic002G125700 Sobic001G252300 Sobic001G252300 Sobic003G087300--Sobic001G252300 Sobic001G444400 Sobic001G444400 Sobic009G106800--Sobic001G444400 Sobic010G084400 Sobic010G084400 Sobic009G106800--Sobic010G084400 Sobic009G106800--Sobic009G196400 Sobic009G106800--Sobic001G100700 Sobic004G111800 Sobic004G111800 Sobic009G106800--Sobic004G111800 Sobic005G213200 Sobic005G213200 Sobic009G106800--Sobic005G213200 Sobic001G243600 Sobic001G243600 Sobic009G106800--Sobic001G243600 Sobic003G252800 Sobic003G252800 Sobic009G106800--Sobic003G252800 Sobic006G153100 Sobic006G153100 Sobic009G106800--Sobic006G153100 Sobic009G139700 Sobic009G139700 Sobic005G203100--Sobic009G139700 Sobic007G148000 Sobic007G148000 Sobic005G203100--Sobic007G148000 Sobic005G203100--Sobic004G333150 Sobic003G088500 Sobic003G088500 Sobic005G203100--Sobic003G088500 Sobic005G203100--Sobic003G087300 Sobic005G203100--Sobic001G503100 Sobic005G203100--Sobic010G052700 Sobic007G005700 Sobic007G005700 Sobic005G203100--Sobic007G005700 Sobic005G203100--Sobic002G125700 Sobic004G273400--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic004G273400--Sobic001G243500 Sobic004G273400--Sobic001G100700 Sobic004G273400--Sobic005G213200 Sobic004G273400--Sobic009G106800 Sobic004G273400--Sobic001G444400 Sobic004G273400--Sobic006G153100 Sobic004G273400--Sobic004G333150 Sobic004G273400--Sobic007G141500 Sobic002G199650 Sobic002G199650 Sobic002G421800--Sobic002G199650 Sobic002G421800--Sobic001G444400 Sobic002G421800--Sobic009G196400 Sobic002G421800--Sobic007G141500 Sobic002G421800--Sobic003G087300 Sobic002G421800--Sobic006G153100 Sobic002G421800--Sobic010G052700 Sobic002G421800--Sobic002G416600 Sobic002G421800--Sobic001G333400 Sobic009G196400--Sobic001G444400 Sobic009G196400--Sobic002G139300 Sobic009G196400--Sobic006G153100 Sobic009G196400--Sobic002G421800 Sobic009G196400--Sobic001G333400 Sobic009G196400--Sobic009G106800 Sobic009G196400--Sobic004G240600 Sobic009G196400--Sobic003G087300 Sobic009G196400--Sobic007G141500 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic009G120000 Sobic009G120000 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic010G209900 Sobic010G209900 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000
Octagon: transcription factors


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