Gene annotation
Transcriptome id Sobic.005G203100.1,Sobic.005G203100.2
Synonym Sb05g025840
Functional annotation tropinone reductase 2, putative, expressed
UniProt A0A1Z5RJK2 , C5Y7D4
Pfam PF13561 PF08659
Panther DB PTHR24322 PTHR24322:SF641
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology K08081; tropinone reductase I
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29350 : senescence-associated gene 13,NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os11g43360.1 : tropinone reductase 2, putative, expressed
MaizeGDB (Corn) Zm00025a015927 , Zm00025a029210
Brachypodium KQK11359 , PNT63092
Barley HORVU1Hr1G084560.1 , HORVU1Hr1G084560.2 , HORVU1Hr1G084560.3 , HORVU1Hr1G084560.4 , HORVU1Hr1G084560.5 , HORVU1Hr1G084560.6 , HORVU1Hr1G084560.7 , HORVU3Hr1G090170.8 , HORVU3Hr1G090170.9 , HORVU3Hr1G090170.1 , HORVU3Hr1G090170.2 , HORVU3Hr1G090170.3 , HORVU3Hr1G090170.4 , HORVU3Hr1G090170.6 , HORVU3Hr1G090170.7 , HORVU1Hr1G086190.1 , HORVU7Hr1G096380.1 , HORVU3Hr1G090170.12 , HORVU3Hr1G090170.13 , HORVU3Hr1G090170.10 , HORVU3Hr1G090170.16 , HORVU3Hr1G090170.14 , HORVU3Hr1G090170.15 , HORVU2Hr1G091780.5 , HORVU2Hr1G091780.4 , HORVU2Hr1G091780.7 , HORVU2Hr1G091780.6 , HORVU2Hr1G091780.1 , HORVU2Hr1G091780.3 , HORVU2Hr1G091780.2 , HORVU2Hr1G091780.9 , HORVU2Hr1G091780.8 , HORVU1Hr1G086200.3 , HORVU1Hr1G086200.2 , HORVU1Hr1G086200.1 , HORVU1Hr1G086200.4 , HORVU2Hr1G091780.11 , HORVU2Hr1G091780.10 , HORVU2Hr1G091780.13 , HORVU2Hr1G091780.12 , HORVU5Hr1G122860.6 , HORVU5Hr1G122860.7 , HORVU5Hr1G122860.4 , HORVU5Hr1G122860.5 , HORVU5Hr1G122860.8
Wheat TraesCS2A02G369400 , TraesCS3D02G396800 , TraesCS1B02G419000 , TraesCS3A02G401900 , TraesCS3B02G435100 , TraesCS3B02G435100 , TraesCS1D02G398800 , TraesCS2D02G366000 , TraesCS3B02G434900 , TraesCS2D02G366000 , TraesCS1A02G390800 , TraesCS2B02G386600 , TraesCS2B02G386600 , TraesCS3A02G402000 , TraesCS1B02G410300 , TraesCS1D02G398900 , TraesCS1B02G418900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G139700 - -
2 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
3 Sobic.004G333150 - -
4 Sobic.003G088500 multicopper oxidase domain containing protein, expressed -
5 Sobic.003G087300 nuclease PA3, putative, expressed -
6 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
7 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.007G005700 expressed protein -
9 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.003G240600 VQ domain containing protein, putative, expressed -
11 Sobic.008G082200 osFTL7 FT-Like7 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
12 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
14 Sobic.004G107700 expressed protein -
15 Sobic.002G368500 B12D protein, putative, expressed -
16 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
17 Sobic.009G217700 - -
18 Sobic.003G271500 expressed protein -
19 Sobic.007G215900 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.008G060050 - -


Gene co-expression network
sample Sobic005G203100 Sobic005G203100 Sobic009G139700 Sobic009G139700 Sobic005G203100--Sobic009G139700 Sobic007G148000 Sobic007G148000 Sobic005G203100--Sobic007G148000 Sobic004G333150 Sobic004G333150 Sobic005G203100--Sobic004G333150 Sobic003G088500 Sobic003G088500 Sobic005G203100--Sobic003G088500 Sobic003G087300 Sobic003G087300 Sobic005G203100--Sobic003G087300 Sobic001G503100 Sobic001G503100 Sobic005G203100--Sobic001G503100 Sobic010G052700 Sobic010G052700 Sobic005G203100--Sobic010G052700 Sobic007G005700 Sobic007G005700 Sobic005G203100--Sobic007G005700 Sobic002G125700 Sobic002G125700 Sobic005G203100--Sobic002G125700 Sobic009G217700 Sobic009G217700 Sobic009G139700--Sobic009G217700 Sobic003G364000 Sobic003G364000 Sobic009G139700--Sobic003G364000 Sobic005G013600 Sobic005G013600 Sobic009G139700--Sobic005G013600 Sobic009G139700--Sobic005G203100 Sobic001G449600 Sobic001G449600 Sobic009G139700--Sobic001G449600 Sobic007G166000 Sobic007G166000 Sobic009G139700--Sobic007G166000 Sobic009G139700--Sobic007G005700 Sobic010G113600 Sobic010G113600 Sobic009G139700--Sobic010G113600 Sobic009G139700--Sobic003G088500 Sobic007G148000--Sobic005G203100 Sobic003G240600 Sobic003G240600 Sobic007G148000--Sobic003G240600 Sobic002G310500 Sobic002G310500 Sobic007G148000--Sobic002G310500 Sobic007G135201 Sobic007G135201 Sobic007G148000--Sobic007G135201 Sobic007G148000--Sobic003G088500 Sobic008G082200 Sobic008G082200 Sobic007G148000--Sobic008G082200 Sobic003G426100 Sobic003G426100 Sobic007G148000--Sobic003G426100 Sobic001G243600 Sobic001G243600 Sobic007G148000--Sobic001G243600 Sobic010G239300 Sobic010G239300 Sobic007G148000--Sobic010G239300 Sobic004G240600 Sobic004G240600 Sobic004G333150--Sobic004G240600 Sobic004G333150--Sobic010G052700 Sobic004G333150--Sobic003G087300 Sobic009G106800 Sobic009G106800 Sobic004G333150--Sobic009G106800 Sobic004G333150--Sobic005G203100 Sobic004G273400 Sobic004G273400 Sobic004G333150--Sobic004G273400 Sobic002G421800 Sobic002G421800 Sobic004G333150--Sobic002G421800 Sobic009G196400 Sobic009G196400 Sobic004G333150--Sobic009G196400 Sobic001G100700 Sobic001G100700 Sobic004G333150--Sobic001G100700 Sobic004G245500 Sobic004G245500 Sobic003G088500--Sobic004G245500 Sobic001G025101 Sobic001G025101 Sobic003G088500--Sobic001G025101 Sobic005G051200 Sobic005G051200 Sobic003G088500--Sobic005G051200 Sobic009G164600 Sobic009G164600 Sobic003G088500--Sobic009G164600 Sobic003G088500--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic003G088500--Sobic002G416600 Sobic001G317200 Sobic001G317200 Sobic003G088500--Sobic001G317200 Sobic003G088500--Sobic003G240600 Sobic010G044400 Sobic010G044400 Sobic003G088500--Sobic010G044400 Sobic003G087300--Sobic002G416600 Sobic003G087300--Sobic010G052700 Sobic003G087300--Sobic010G239300 Sobic007G141500 Sobic007G141500 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic004G166700 Sobic004G166700 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic003G087300--Sobic002G125700 Sobic001G252300 Sobic001G252300 Sobic003G087300--Sobic001G252300 Sobic001G503100--Sobic002G125700 Sobic006G277600 Sobic006G277600 Sobic001G503100--Sobic006G277600 Sobic003G352300 Sobic003G352300 Sobic001G503100--Sobic003G352300 Sobic006G125100 Sobic006G125100 Sobic001G503100--Sobic006G125100 Sobic001G503100--Sobic010G052700 Sobic004G107700 Sobic004G107700 Sobic001G503100--Sobic004G107700 Sobic003G255200 Sobic003G255200 Sobic001G503100--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic001G503100--Sobic002G004900 Sobic003G255500 Sobic003G255500 Sobic001G503100--Sobic003G255500 Sobic010G052700--Sobic001G503100 Sobic010G052700--Sobic003G087300 Sobic001G333400 Sobic001G333400 Sobic010G052700--Sobic001G333400 Sobic003G280200 Sobic003G280200 Sobic010G052700--Sobic003G280200 Sobic010G052700--Sobic007G141500 Sobic005G011200 Sobic005G011200 Sobic010G052700--Sobic005G011200 Sobic010G052700--Sobic003G364000 Sobic010G052700--Sobic002G004900 Sobic010G052700--Sobic002G125700 Sobic005G063300 Sobic005G063300 Sobic007G005700--Sobic005G063300 Sobic007G005700--Sobic009G139700 Sobic007G005700--Sobic002G125700 Sobic007G005700--Sobic001G449600 Sobic007G005700--Sobic009G217700 Sobic007G005700--Sobic003G255200 Sobic007G005700--Sobic007G166000 Sobic007G005700--Sobic005G013600 Sobic003G155600 Sobic003G155600 Sobic007G005700--Sobic003G155600 Sobic002G125700--Sobic003G255200 Sobic002G125700--Sobic001G503100 Sobic002G125700--Sobic003G352300 Sobic010G259600 Sobic010G259600 Sobic002G125700--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic002G125700--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic002G125700--Sobic007G087200 Sobic002G125700--Sobic004G107700 Sobic002G125700--Sobic009G231000 Sobic010G063000 Sobic010G063000 Sobic002G125700--Sobic010G063000
Octagon: transcription factors


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