Gene annotation
Transcriptome id Sobic.006G214600.1
Synonym Sb06g028480
Functional annotation -
UniProt C5YG10
Pfam -
Panther DB PTHR31568
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32210 : -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a057028 , Zm00025a009797
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G364950 - -
2 Sobic.010G043900 expressed protein -
3 Sobic.002G422300 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
4 Sobic.004G278400 DUF581 domain containing protein, expressed -
5 Sobic.006G190700 - -
6 Sobic.001G054500 expressed protein -
7 Sobic.005G108601 - -
8 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
9 Sobic.006G227750 - -
10 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
11 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.007G008000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.006G113500 heavy metal associated domain containing protein, expressed -
14 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
15 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.004G148100 Cupin domain containing protein, expressed -
17 Sobic.006G101300 expressed protein -
18 Sobic.001G256200 expressed protein -
19 Sobic.002G004900 transporter family protein, putative, expressed -
20 Sobic.006G234900 expressed protein -


Gene co-expression network
sample Sobic006G214600 Sobic006G214600 Sobic003G364950 Sobic003G364950 Sobic006G214600--Sobic003G364950 Sobic010G043900 Sobic010G043900 Sobic006G214600--Sobic010G043900 Sobic002G422300 Sobic002G422300 Sobic006G214600--Sobic002G422300 Sobic004G278400 Sobic004G278400 Sobic006G214600--Sobic004G278400 Sobic006G190700 Sobic006G190700 Sobic006G214600--Sobic006G190700 Sobic001G054500 Sobic001G054500 Sobic006G214600--Sobic001G054500 Sobic005G108601 Sobic005G108601 Sobic006G214600--Sobic005G108601 Sobic004G045400 Sobic004G045400 Sobic006G214600--Sobic004G045400 Sobic006G227750 Sobic006G227750 Sobic006G214600--Sobic006G227750 Sobic003G364950--Sobic006G214600 Sobic003G364950--Sobic010G043900 Sobic004G292001 Sobic004G292001 Sobic003G364950--Sobic004G292001 Sobic003G364950--Sobic004G278400 Sobic005G213500 Sobic005G213500 Sobic003G364950--Sobic005G213500 Sobic003G364300 Sobic003G364300 Sobic003G364950--Sobic003G364300 Sobic003G364950--Sobic002G422300 Sobic003G364000 Sobic003G364000 Sobic003G364950--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G364950--Sobic002G004900 Sobic002G338500 Sobic002G338500 Sobic010G043900--Sobic002G338500 Sobic008G027600 Sobic008G027600 Sobic010G043900--Sobic008G027600 Sobic010G043900--Sobic002G422300 Sobic005G213600 Sobic005G213600 Sobic010G043900--Sobic005G213600 Sobic006G158400 Sobic006G158400 Sobic010G043900--Sobic006G158400 Sobic001G238400 Sobic001G238400 Sobic010G043900--Sobic001G238400 Sobic003G026400 Sobic003G026400 Sobic010G043900--Sobic003G026400 Sobic003G043600 Sobic003G043600 Sobic010G043900--Sobic003G043600 Sobic010G043900--Sobic005G213500 Sobic002G422300--Sobic010G043900 Sobic008G158332 Sobic008G158332 Sobic002G422300--Sobic008G158332 Sobic002G010900 Sobic002G010900 Sobic002G422300--Sobic002G010900 Sobic001G114900 Sobic001G114900 Sobic002G422300--Sobic001G114900 Sobic006G268500 Sobic006G268500 Sobic002G422300--Sobic006G268500 Sobic009G071000 Sobic009G071000 Sobic002G422300--Sobic009G071000 Sobic002G422300--Sobic008G027600 Sobic006G101300 Sobic006G101300 Sobic002G422300--Sobic006G101300 Sobic002G422300--Sobic003G026400 Sobic004G278400--Sobic003G364950 Sobic004G278400--Sobic006G214600 Sobic004G278400--Sobic004G292001 Sobic004G278400--Sobic003G364000 Sobic004G278400--Sobic003G364300 Sobic004G352301 Sobic004G352301 Sobic004G278400--Sobic004G352301 Sobic004G278400--Sobic005G213500 Sobic001G433900 Sobic001G433900 Sobic004G278400--Sobic001G433900 Sobic005G005600 Sobic005G005600 Sobic004G278400--Sobic005G005600 Sobic004G240600 Sobic004G240600 Sobic006G190700--Sobic004G240600 Sobic002G139300 Sobic002G139300 Sobic006G190700--Sobic002G139300 Sobic010G052700 Sobic010G052700 Sobic006G190700--Sobic010G052700 Sobic006G190700--Sobic006G214600 Sobic004G333150 Sobic004G333150 Sobic006G190700--Sobic004G333150 Sobic001G333400 Sobic001G333400 Sobic006G190700--Sobic001G333400 Sobic005G011200 Sobic005G011200 Sobic006G190700--Sobic005G011200 Sobic003G280200 Sobic003G280200 Sobic006G190700--Sobic003G280200 Sobic008G158100 Sobic008G158100 Sobic006G190700--Sobic008G158100 Sobic002G042000 Sobic002G042000 Sobic001G054500--Sobic002G042000 Sobic007G008100 Sobic007G008100 Sobic001G054500--Sobic007G008100 Sobic002G040900 Sobic002G040900 Sobic001G054500--Sobic002G040900 Sobic001G256200 Sobic001G256200 Sobic001G054500--Sobic001G256200 Sobic001G054500--Sobic003G364300 Sobic004G148100 Sobic004G148100 Sobic001G054500--Sobic004G148100 Sobic006G113500 Sobic006G113500 Sobic001G054500--Sobic006G113500 Sobic007G008000 Sobic007G008000 Sobic001G054500--Sobic007G008000 Sobic009G009700 Sobic009G009700 Sobic001G054500--Sobic009G009700 Sobic002G115025 Sobic002G115025 Sobic005G108601--Sobic002G115025 Sobic006G234900 Sobic006G234900 Sobic005G108601--Sobic006G234900 Sobic005G108601--Sobic001G256200 Sobic005G108601--Sobic006G227750 Sobic005G108601--Sobic006G101300 Sobic006G217900 Sobic006G217900 Sobic005G108601--Sobic006G217900 Sobic002G093700 Sobic002G093700 Sobic005G108601--Sobic002G093700 Sobic005G108601--Sobic001G054500 Sobic005G108601--Sobic002G042000 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic004G045400--Sobic006G158400 Sobic004G045400--Sobic002G042000 Sobic004G045400--Sobic001G054500 Sobic004G045400--Sobic003G364300 Sobic004G045400--Sobic007G008100 Sobic001G361600 Sobic001G361600 Sobic004G045400--Sobic001G361600 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic006G227750--Sobic006G268500 Sobic009G157450 Sobic009G157450 Sobic006G227750--Sobic009G157450 Sobic006G227750--Sobic006G234900 Sobic008G140900 Sobic008G140900 Sobic006G227750--Sobic008G140900 Sobic006G227750--Sobic009G071000 Sobic006G227750--Sobic002G422300 Sobic006G227750--Sobic005G108601 Sobic006G227750--Sobic008G158332 Sobic006G026500 Sobic006G026500 Sobic006G227750--Sobic006G026500
Octagon: transcription factors


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