Gene annotation
Transcriptome id Sobic.006G113500.1
Synonym Sb06g019510
Functional annotation heavy metal associated domain containing protein, expressed
UniProt C5YA98
Pfam -
Panther DB PTHR22814 PTHR22814:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48290 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os04g39010.1 : heavy metal associated domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G148100 Cupin domain containing protein, expressed -
2 Sobic.002G040900 VQ domain containing protein, putative, expressed -
3 Sobic.001G054500 expressed protein -
4 Sobic.001G256200 expressed protein -
5 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
7 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
8 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
9 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.001G462700 expressed protein -
11 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
12 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
13 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
15 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
17 Sobic.002G004900 transporter family protein, putative, expressed -
18 Sobic.009G231000 - -
19 Sobic.007G204700 expressed protein -
20 Sobic.003G087300 nuclease PA3, putative, expressed -


Gene co-expression network
sample Sobic006G113500 Sobic006G113500 Sobic004G148100 Sobic004G148100 Sobic006G113500--Sobic004G148100 Sobic002G040900 Sobic002G040900 Sobic006G113500--Sobic002G040900 Sobic001G054500 Sobic001G054500 Sobic006G113500--Sobic001G054500 Sobic001G256200 Sobic001G256200 Sobic006G113500--Sobic001G256200 Sobic007G008100 Sobic007G008100 Sobic006G113500--Sobic007G008100 Sobic001G325400 Sobic001G325400 Sobic006G113500--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic006G113500--Sobic006G039100 Sobic006G162100 Sobic006G162100 Sobic006G113500--Sobic006G162100 Sobic002G042000 Sobic002G042000 Sobic006G113500--Sobic002G042000 Sobic004G148100--Sobic002G040900 Sobic004G148100--Sobic006G162100 Sobic004G148100--Sobic006G113500 Sobic005G177600 Sobic005G177600 Sobic004G148100--Sobic005G177600 Sobic007G215600 Sobic007G215600 Sobic004G148100--Sobic007G215600 Sobic004G148100--Sobic001G054500 Sobic004G148100--Sobic006G039100 Sobic004G148100--Sobic002G042000 Sobic004G148100--Sobic007G008100 Sobic002G040900--Sobic004G148100 Sobic002G040900--Sobic001G054500 Sobic002G040900--Sobic001G256200 Sobic002G040900--Sobic002G042000 Sobic002G040900--Sobic006G113500 Sobic002G040900--Sobic007G008100 Sobic002G040900--Sobic005G177600 Sobic002G040900--Sobic006G162100 Sobic007G144501 Sobic007G144501 Sobic002G040900--Sobic007G144501 Sobic001G054500--Sobic002G042000 Sobic001G054500--Sobic007G008100 Sobic001G054500--Sobic002G040900 Sobic001G054500--Sobic001G256200 Sobic003G364300 Sobic003G364300 Sobic001G054500--Sobic003G364300 Sobic001G054500--Sobic004G148100 Sobic001G054500--Sobic006G113500 Sobic007G008000 Sobic007G008000 Sobic001G054500--Sobic007G008000 Sobic009G009700 Sobic009G009700 Sobic001G054500--Sobic009G009700 Sobic001G256200--Sobic002G040900 Sobic001G256200--Sobic001G054500 Sobic001G256200--Sobic002G042000 Sobic002G115025 Sobic002G115025 Sobic001G256200--Sobic002G115025 Sobic001G256200--Sobic004G148100 Sobic001G256200--Sobic007G144501 Sobic001G256200--Sobic006G113500 Sobic001G256200--Sobic009G009700 Sobic006G234900 Sobic006G234900 Sobic001G256200--Sobic006G234900 Sobic007G008100--Sobic002G042000 Sobic007G008100--Sobic001G054500 Sobic004G336500 Sobic004G336500 Sobic007G008100--Sobic004G336500 Sobic007G008100--Sobic003G364300 Sobic007G008100--Sobic007G008000 Sobic009G069800 Sobic009G069800 Sobic007G008100--Sobic009G069800 Sobic009G154200 Sobic009G154200 Sobic007G008100--Sobic009G154200 Sobic008G139600 Sobic008G139600 Sobic007G008100--Sobic008G139600 Sobic007G008100--Sobic002G040900 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic002G125700 Sobic002G125700 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic009G077800 Sobic009G077800 Sobic001G325400--Sobic009G077800 Sobic002G017800 Sobic002G017800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic007G087200 Sobic007G087200 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic006G039100--Sobic001G325400 Sobic006G039100--Sobic009G231000 Sobic006G039100--Sobic001G462700 Sobic004G189500 Sobic004G189500 Sobic006G039100--Sobic004G189500 Sobic003G087300 Sobic003G087300 Sobic006G039100--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic006G039100--Sobic002G416600 Sobic002G366600 Sobic002G366600 Sobic006G039100--Sobic002G366600 Sobic006G039100--Sobic004G148100 Sobic006G039100--Sobic009G077800 Sobic006G162100--Sobic004G148100 Sobic006G162100--Sobic007G215600 Sobic006G162100--Sobic002G040900 Sobic006G162100--Sobic004G189500 Sobic006G162100--Sobic006G039100 Sobic002G055700 Sobic002G055700 Sobic006G162100--Sobic002G055700 Sobic006G162100--Sobic005G177600 Sobic006G162100--Sobic006G113500 Sobic006G162100--Sobic001G325400 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic002G042000--Sobic003G364300 Sobic002G042000--Sobic009G069800 Sobic002G042000--Sobic001G256200 Sobic006G101300 Sobic006G101300 Sobic002G042000--Sobic006G101300 Sobic002G042000--Sobic004G148100 Sobic002G042000--Sobic007G008000
Octagon: transcription factors


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