Gene annotation
Transcriptome id Sobic.001G054500.2
Synonym Sb01g004985
Functional annotation expressed protein
UniProt A0A1Z5S4H3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g58500.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK12675
Barley -
Wheat TraesCS5A02G447100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
3 Sobic.002G040900 VQ domain containing protein, putative, expressed -
4 Sobic.001G256200 expressed protein -
5 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.004G148100 Cupin domain containing protein, expressed -
7 Sobic.006G113500 heavy metal associated domain containing protein, expressed -
8 Sobic.007G008000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.009G009700 expressed protein -
10 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
11 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.009G154200 MYB family transcription factor, putative, expressed -
13 Sobic.010G156500 expressed protein -
14 Sobic.009G231000 - -
15 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
16 Sobic.002G115025 - -
17 Sobic.007G144501 - -
18 Sobic.006G217900 Leucine-rich receptor-like protein kinase("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed K13420: LRR receptor-like serine/threonine-protein kinase FLS2
19 Sobic.006G101300 expressed protein -
20 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic001G054500 Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic001G054500--Sobic002G042000 Sobic007G008100 Sobic007G008100 Sobic001G054500--Sobic007G008100 Sobic002G040900 Sobic002G040900 Sobic001G054500--Sobic002G040900 Sobic001G256200 Sobic001G256200 Sobic001G054500--Sobic001G256200 Sobic003G364300 Sobic003G364300 Sobic001G054500--Sobic003G364300 Sobic004G148100 Sobic004G148100 Sobic001G054500--Sobic004G148100 Sobic006G113500 Sobic006G113500 Sobic001G054500--Sobic006G113500 Sobic007G008000 Sobic007G008000 Sobic001G054500--Sobic007G008000 Sobic009G009700 Sobic009G009700 Sobic001G054500--Sobic009G009700 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic002G042000--Sobic003G364300 Sobic009G069800 Sobic009G069800 Sobic002G042000--Sobic009G069800 Sobic002G042000--Sobic001G256200 Sobic006G101300 Sobic006G101300 Sobic002G042000--Sobic006G101300 Sobic002G042000--Sobic004G148100 Sobic002G042000--Sobic007G008000 Sobic007G008100--Sobic002G042000 Sobic007G008100--Sobic001G054500 Sobic004G336500 Sobic004G336500 Sobic007G008100--Sobic004G336500 Sobic007G008100--Sobic003G364300 Sobic007G008100--Sobic007G008000 Sobic007G008100--Sobic009G069800 Sobic009G154200 Sobic009G154200 Sobic007G008100--Sobic009G154200 Sobic008G139600 Sobic008G139600 Sobic007G008100--Sobic008G139600 Sobic007G008100--Sobic002G040900 Sobic002G040900--Sobic004G148100 Sobic002G040900--Sobic001G054500 Sobic002G040900--Sobic001G256200 Sobic002G040900--Sobic002G042000 Sobic002G040900--Sobic006G113500 Sobic002G040900--Sobic007G008100 Sobic005G177600 Sobic005G177600 Sobic002G040900--Sobic005G177600 Sobic006G162100 Sobic006G162100 Sobic002G040900--Sobic006G162100 Sobic007G144501 Sobic007G144501 Sobic002G040900--Sobic007G144501 Sobic001G256200--Sobic002G040900 Sobic001G256200--Sobic001G054500 Sobic001G256200--Sobic002G042000 Sobic002G115025 Sobic002G115025 Sobic001G256200--Sobic002G115025 Sobic001G256200--Sobic004G148100 Sobic001G256200--Sobic007G144501 Sobic001G256200--Sobic006G113500 Sobic001G256200--Sobic009G009700 Sobic006G234900 Sobic006G234900 Sobic001G256200--Sobic006G234900 Sobic010G156500 Sobic010G156500 Sobic003G364300--Sobic010G156500 Sobic009G231000 Sobic009G231000 Sobic003G364300--Sobic009G231000 Sobic002G338500 Sobic002G338500 Sobic003G364300--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic003G364300--Sobic003G364000 Sobic003G364300--Sobic007G008100 Sobic003G364300--Sobic002G042000 Sobic003G382600 Sobic003G382600 Sobic003G364300--Sobic003G382600 Sobic003G364300--Sobic001G054500 Sobic002G302500 Sobic002G302500 Sobic003G364300--Sobic002G302500 Sobic004G148100--Sobic002G040900 Sobic004G148100--Sobic006G162100 Sobic004G148100--Sobic006G113500 Sobic004G148100--Sobic005G177600 Sobic007G215600 Sobic007G215600 Sobic004G148100--Sobic007G215600 Sobic004G148100--Sobic001G054500 Sobic006G039100 Sobic006G039100 Sobic004G148100--Sobic006G039100 Sobic004G148100--Sobic002G042000 Sobic004G148100--Sobic007G008100 Sobic006G113500--Sobic004G148100 Sobic006G113500--Sobic002G040900 Sobic006G113500--Sobic001G054500 Sobic006G113500--Sobic001G256200 Sobic006G113500--Sobic007G008100 Sobic001G325400 Sobic001G325400 Sobic006G113500--Sobic001G325400 Sobic006G113500--Sobic006G039100 Sobic006G113500--Sobic006G162100 Sobic006G113500--Sobic002G042000 Sobic007G008000--Sobic007G008100 Sobic007G008000--Sobic002G042000 Sobic001G259900 Sobic001G259900 Sobic007G008000--Sobic001G259900 Sobic010G082600 Sobic010G082600 Sobic007G008000--Sobic010G082600 Sobic007G008000--Sobic001G054500 Sobic007G008000--Sobic006G101300 Sobic007G008000--Sobic002G338500 Sobic007G008000--Sobic008G139600 Sobic009G145700 Sobic009G145700 Sobic007G008000--Sobic009G145700 Sobic009G009700--Sobic001G054500 Sobic009G009700--Sobic002G040900 Sobic009G009700--Sobic001G256200 Sobic009G009700--Sobic004G148100 Sobic009G009700--Sobic002G042000 Sobic009G009600 Sobic009G009600 Sobic009G009700--Sobic009G009600 Sobic009G009700--Sobic007G008100 Sobic003G155600 Sobic003G155600 Sobic009G009700--Sobic003G155600 Sobic002G093700 Sobic002G093700 Sobic009G009700--Sobic002G093700
Octagon: transcription factors


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