Gene annotation
Transcriptome id Sobic.009G154200.1
Synonym Sb09g021770
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YYS2
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF279
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04760 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os05g37060.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a024152 , Zm00025a039576 , Zm00025a039619 , Zm00025a035199 , Zm00025a043800
Brachypodium KQK10731 , PNT71169
Barley HORVU1Hr1G073300.2 , HORVU1Hr1G073300.3 , HORVU1Hr1G073300.1 , HORVU1Hr1G073940.1 , HORVU1Hr1G073940.2 , HORVU1Hr1G073940.3 , HORVU1Hr1G073940.4 , HORVU1Hr1G073940.5 , HORVU1Hr1G073940.6 , HORVU3Hr1G083740.3 , HORVU3Hr1G083740.1 , HORVU3Hr1G083740.5 , HORVU3Hr1G083740.4 , HORVU3Hr1G085180.3 , HORVU3Hr1G085180.1
Wheat TraesCS3A02G375500 , TraesCS1B02G287700 , TraesCS3D02G368000 , TraesCS1A02G278900 , TraesCS3B02G407700 , TraesCS3D02G360500 , TraesCS1D02G275400 , TraesCS3A02G367600 , TraesCS1A02G275800 , TraesCS1B02G285000
Populus -


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cDNA sequences
Sobic.009G154200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
2 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.010G156500 expressed protein -
5 Sobic.003G382600 ARGOS, putative, expressed -
6 Sobic.009G231000 - -
7 Sobic.001G279500 VQ domain containing protein, putative, expressed -
8 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
9 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
11 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
12 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
13 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
15 Sobic.010G166500 amino acid transporter, putative, expressed -
16 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
17 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.001G477600 zinc finger protein, putative, expressed -
19 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
20 Sobic.001G070800 expressed protein -


Gene co-expression network
sample Sobic009G154200 Sobic009G154200 Sobic007G008100 Sobic007G008100 Sobic009G154200--Sobic007G008100 Sobic003G364300 Sobic003G364300 Sobic009G154200--Sobic003G364300 Sobic004G336500 Sobic004G336500 Sobic009G154200--Sobic004G336500 Sobic010G156500 Sobic010G156500 Sobic009G154200--Sobic010G156500 Sobic003G382600 Sobic003G382600 Sobic009G154200--Sobic003G382600 Sobic009G231000 Sobic009G231000 Sobic009G154200--Sobic009G231000 Sobic001G279500 Sobic001G279500 Sobic009G154200--Sobic001G279500 Sobic003G345100 Sobic003G345100 Sobic009G154200--Sobic003G345100 Sobic001G112200 Sobic001G112200 Sobic009G154200--Sobic001G112200 Sobic002G042000 Sobic002G042000 Sobic007G008100--Sobic002G042000 Sobic001G054500 Sobic001G054500 Sobic007G008100--Sobic001G054500 Sobic007G008100--Sobic004G336500 Sobic007G008100--Sobic003G364300 Sobic007G008000 Sobic007G008000 Sobic007G008100--Sobic007G008000 Sobic009G069800 Sobic009G069800 Sobic007G008100--Sobic009G069800 Sobic007G008100--Sobic009G154200 Sobic008G139600 Sobic008G139600 Sobic007G008100--Sobic008G139600 Sobic002G040900 Sobic002G040900 Sobic007G008100--Sobic002G040900 Sobic003G364300--Sobic010G156500 Sobic003G364300--Sobic009G231000 Sobic002G338500 Sobic002G338500 Sobic003G364300--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic003G364300--Sobic003G364000 Sobic003G364300--Sobic007G008100 Sobic003G364300--Sobic002G042000 Sobic003G364300--Sobic003G382600 Sobic003G364300--Sobic001G054500 Sobic002G302500 Sobic002G302500 Sobic003G364300--Sobic002G302500 Sobic004G336500--Sobic009G069800 Sobic003G367200 Sobic003G367200 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic004G336500--Sobic007G008100 Sobic004G336500--Sobic001G112200 Sobic010G225251 Sobic010G225251 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic001G280800 Sobic001G280800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic010G156500--Sobic003G364000 Sobic010G156500--Sobic003G382600 Sobic005G213500 Sobic005G213500 Sobic010G156500--Sobic005G213500 Sobic010G156500--Sobic001G279500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic010G156500--Sobic009G231000 Sobic002G055700 Sobic002G055700 Sobic003G382600--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic003G382600--Sobic004G189400 Sobic003G382600--Sobic002G338500 Sobic002G353900 Sobic002G353900 Sobic003G382600--Sobic002G353900 Sobic003G303100 Sobic003G303100 Sobic003G382600--Sobic003G303100 Sobic004G237800 Sobic004G237800 Sobic003G382600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic003G382600--Sobic005G091500 Sobic008G050600 Sobic008G050600 Sobic003G382600--Sobic008G050600 Sobic003G043600 Sobic003G043600 Sobic003G382600--Sobic003G043600 Sobic009G231000--Sobic003G364300 Sobic010G259600 Sobic010G259600 Sobic009G231000--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic009G231000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic009G231000--Sobic006G039100 Sobic002G125700 Sobic002G125700 Sobic009G231000--Sobic002G125700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic003G297600 Sobic003G297600 Sobic009G231000--Sobic003G297600 Sobic009G231000--Sobic010G156500 Sobic001G279500--Sobic003G382600 Sobic001G279500--Sobic001G112200 Sobic001G279500--Sobic010G156500 Sobic001G310600 Sobic001G310600 Sobic001G279500--Sobic001G310600 Sobic001G279500--Sobic003G364300 Sobic005G107900 Sobic005G107900 Sobic001G279500--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic001G279500--Sobic001G502400 Sobic001G279500--Sobic003G345100 Sobic001G279500--Sobic002G338500 Sobic003G345100--Sobic008G050600 Sobic005G063100 Sobic005G063100 Sobic003G345100--Sobic005G063100 Sobic009G164600 Sobic009G164600 Sobic003G345100--Sobic009G164600 Sobic001G140900 Sobic001G140900 Sobic003G345100--Sobic001G140900 Sobic004G208700 Sobic004G208700 Sobic003G345100--Sobic004G208700 Sobic005G099000 Sobic005G099000 Sobic003G345100--Sobic005G099000 Sobic009G159400 Sobic009G159400 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic003G345100--Sobic001G435000 Sobic009G184000 Sobic009G184000 Sobic001G112200--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic001G112200--Sobic001G318700 Sobic001G112200--Sobic001G138600 Sobic001G112200--Sobic003G369100 Sobic007G169700 Sobic007G169700 Sobic001G112200--Sobic007G169700 Sobic001G112200--Sobic004G237800 Sobic009G145700 Sobic009G145700 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G112200--Sobic001G310600
Octagon: transcription factors


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