Gene annotation
Transcriptome id Sobic.007G144501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RAU5
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G73066 : Leucine-rich repeat family protein
RAP-DB (Rice) LOC_Os08g34640.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a034269 , Zm00025a000639 , Zm00025a005825 , Zm00025a030716 , Zm00025a030715
Brachypodium -
Barley -
Wheat TraesCS7D02G150200 , TraesCS7D02G150200 , TraesCS7D02G150200 , TraesCS7D02G150200 , TraesCS7B02G052200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G256200 expressed protein -
2 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.002G040900 VQ domain containing protein, putative, expressed -
4 Sobic.002G093700 Jacalin-like lectin domain containing protein, putative, expressed -
5 Sobic.001G054500 expressed protein -
6 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
7 Sobic.002G115025 - -
8 Sobic.006G234900 expressed protein -
9 Sobic.006G101300 expressed protein -
10 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.004G148100 Cupin domain containing protein, expressed -
12 Sobic.006G113500 heavy metal associated domain containing protein, expressed -
13 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.006G159100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.001G487400 expressed protein -
16 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.007G008000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
20 Sobic.003G418500 OsGrx_C6 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic007G144501 Sobic007G144501 Sobic001G256200 Sobic001G256200 Sobic007G144501--Sobic001G256200 Sobic002G042000 Sobic002G042000 Sobic007G144501--Sobic002G042000 Sobic002G040900 Sobic002G040900 Sobic007G144501--Sobic002G040900 Sobic002G093700 Sobic002G093700 Sobic007G144501--Sobic002G093700 Sobic001G054500 Sobic001G054500 Sobic007G144501--Sobic001G054500 Sobic004G045400 Sobic004G045400 Sobic007G144501--Sobic004G045400 Sobic002G115025 Sobic002G115025 Sobic007G144501--Sobic002G115025 Sobic006G234900 Sobic006G234900 Sobic007G144501--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic007G144501--Sobic006G101300 Sobic001G256200--Sobic002G040900 Sobic001G256200--Sobic001G054500 Sobic001G256200--Sobic002G042000 Sobic001G256200--Sobic002G115025 Sobic004G148100 Sobic004G148100 Sobic001G256200--Sobic004G148100 Sobic001G256200--Sobic007G144501 Sobic006G113500 Sobic006G113500 Sobic001G256200--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic001G256200--Sobic009G009700 Sobic001G256200--Sobic006G234900 Sobic007G008100 Sobic007G008100 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic003G364300 Sobic003G364300 Sobic002G042000--Sobic003G364300 Sobic009G069800 Sobic009G069800 Sobic002G042000--Sobic009G069800 Sobic002G042000--Sobic001G256200 Sobic002G042000--Sobic006G101300 Sobic002G042000--Sobic004G148100 Sobic007G008000 Sobic007G008000 Sobic002G042000--Sobic007G008000 Sobic002G040900--Sobic004G148100 Sobic002G040900--Sobic001G054500 Sobic002G040900--Sobic001G256200 Sobic002G040900--Sobic002G042000 Sobic002G040900--Sobic006G113500 Sobic002G040900--Sobic007G008100 Sobic005G177600 Sobic005G177600 Sobic002G040900--Sobic005G177600 Sobic006G162100 Sobic006G162100 Sobic002G040900--Sobic006G162100 Sobic002G040900--Sobic007G144501 Sobic001G487400 Sobic001G487400 Sobic002G093700--Sobic001G487400 Sobic008G128066 Sobic008G128066 Sobic002G093700--Sobic008G128066 Sobic006G019200 Sobic006G019200 Sobic002G093700--Sobic006G019200 Sobic002G093700--Sobic007G144501 Sobic002G093700--Sobic006G234900 Sobic002G093700--Sobic002G115025 Sobic002G093700--Sobic004G045400 Sobic002G093700--Sobic001G256200 Sobic006G078900 Sobic006G078900 Sobic002G093700--Sobic006G078900 Sobic001G054500--Sobic002G042000 Sobic001G054500--Sobic007G008100 Sobic001G054500--Sobic002G040900 Sobic001G054500--Sobic001G256200 Sobic001G054500--Sobic003G364300 Sobic001G054500--Sobic004G148100 Sobic001G054500--Sobic006G113500 Sobic001G054500--Sobic007G008000 Sobic001G054500--Sobic009G009700 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic006G158400 Sobic006G158400 Sobic004G045400--Sobic006G158400 Sobic004G045400--Sobic002G042000 Sobic004G045400--Sobic001G054500 Sobic004G045400--Sobic003G364300 Sobic004G045400--Sobic007G008100 Sobic001G361600 Sobic001G361600 Sobic004G045400--Sobic001G361600 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic005G108601 Sobic005G108601 Sobic002G115025--Sobic005G108601 Sobic002G115025--Sobic006G234900 Sobic002G115025--Sobic001G256200 Sobic006G217900 Sobic006G217900 Sobic002G115025--Sobic006G217900 Sobic002G115025--Sobic002G042000 Sobic002G115025--Sobic001G054500 Sobic002G115025--Sobic002G093700 Sobic002G115025--Sobic007G144501 Sobic002G115025--Sobic006G101300 Sobic006G234900--Sobic005G108601 Sobic006G234900--Sobic006G101300 Sobic006G234900--Sobic002G115025 Sobic006G026500 Sobic006G026500 Sobic006G234900--Sobic006G026500 Sobic003G418500 Sobic003G418500 Sobic006G234900--Sobic003G418500 Sobic006G234900--Sobic001G256200 Sobic006G234900--Sobic002G042000 Sobic006G234900--Sobic002G093700 Sobic006G227750 Sobic006G227750 Sobic006G234900--Sobic006G227750 Sobic006G101300--Sobic006G234900 Sobic006G101100 Sobic006G101100 Sobic006G101300--Sobic006G101100 Sobic006G101300--Sobic002G042000 Sobic006G101300--Sobic006G026500 Sobic008G066200 Sobic008G066200 Sobic006G101300--Sobic008G066200 Sobic004G169300 Sobic004G169300 Sobic006G101300--Sobic004G169300 Sobic006G101300--Sobic007G008000 Sobic008G022000 Sobic008G022000 Sobic006G101300--Sobic008G022000 Sobic006G101300--Sobic003G418500
Octagon: transcription factors


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