Gene annotation
Transcriptome id Sobic.001G487400.1
Synonym Sb01g045600
Functional annotation expressed protein
UniProt C5WVW7
Pfam -
Panther DB PTHR11413 PTHR11413:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004869; cysteine-type endopeptidase inhibitor activity


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g07660.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.002G093700 Jacalin-like lectin domain containing protein, putative, expressed -
3 Sobic.006G019200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR4 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
4 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
5 Sobic.008G128066 - -
6 Sobic.009G209500 RING/U-box superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
7 Sobic.001G340400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@leucoanthocyanidin dioxygenase, putative, expressed -
8 Sobic.007G144501 - -
9 Sobic.001G256200 expressed protein -
10 Sobic.001G054500 expressed protein -
11 Sobic.001G364400 cytochrome P450, putative, expressed -
12 Sobic.003G155600 exo70 exocyst complex subunit family protein, putative, expressed -
13 Sobic.006G150700 DEF12 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.005G014000 WRKY64, expressed -
15 Sobic.001G039200 expressed protein -
16 Sobic.006G078900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
17 Sobic.002G040900 VQ domain containing protein, putative, expressed -
18 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
19 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
20 Sobic.007G204700 expressed protein -


Gene co-expression network
sample Sobic001G487400 Sobic001G487400 Sobic008G144600 Sobic008G144600 Sobic001G487400--Sobic008G144600 Sobic002G093700 Sobic002G093700 Sobic001G487400--Sobic002G093700 Sobic006G019200 Sobic006G019200 Sobic001G487400--Sobic006G019200 Sobic004G045400 Sobic004G045400 Sobic001G487400--Sobic004G045400 Sobic008G128066 Sobic008G128066 Sobic001G487400--Sobic008G128066 Sobic009G209500 Sobic009G209500 Sobic001G487400--Sobic009G209500 Sobic001G340400 Sobic001G340400 Sobic001G487400--Sobic001G340400 Sobic007G144501 Sobic007G144501 Sobic001G487400--Sobic007G144501 Sobic001G256200 Sobic001G256200 Sobic001G487400--Sobic001G256200 Sobic008G144600--Sobic001G487400 Sobic006G150700 Sobic006G150700 Sobic008G144600--Sobic006G150700 Sobic002G213600 Sobic002G213600 Sobic008G144600--Sobic002G213600 Sobic003G016100 Sobic003G016100 Sobic008G144600--Sobic003G016100 Sobic003G363900 Sobic003G363900 Sobic008G144600--Sobic003G363900 Sobic001G039200 Sobic001G039200 Sobic008G144600--Sobic001G039200 Sobic008G144600--Sobic001G340400 Sobic003G079400 Sobic003G079400 Sobic008G144600--Sobic003G079400 Sobic008G144600--Sobic002G093700 Sobic002G093700--Sobic001G487400 Sobic002G093700--Sobic008G128066 Sobic002G093700--Sobic006G019200 Sobic002G093700--Sobic007G144501 Sobic006G234900 Sobic006G234900 Sobic002G093700--Sobic006G234900 Sobic002G115025 Sobic002G115025 Sobic002G093700--Sobic002G115025 Sobic002G093700--Sobic004G045400 Sobic002G093700--Sobic001G256200 Sobic006G078900 Sobic006G078900 Sobic002G093700--Sobic006G078900 Sobic005G014000 Sobic005G014000 Sobic006G019200--Sobic005G014000 Sobic006G019200--Sobic002G093700 Sobic006G019200--Sobic001G487400 Sobic006G019200--Sobic008G144600 Sobic006G019200--Sobic009G209500 Sobic006G019200--Sobic001G340400 Sobic001G237900 Sobic001G237900 Sobic006G019200--Sobic001G237900 Sobic002G125000 Sobic002G125000 Sobic006G019200--Sobic002G125000 Sobic002G124500 Sobic002G124500 Sobic006G019200--Sobic002G124500 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic006G158400 Sobic006G158400 Sobic004G045400--Sobic006G158400 Sobic002G042000 Sobic002G042000 Sobic004G045400--Sobic002G042000 Sobic001G054500 Sobic001G054500 Sobic004G045400--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic004G045400--Sobic003G364300 Sobic007G008100 Sobic007G008100 Sobic004G045400--Sobic007G008100 Sobic001G361600 Sobic001G361600 Sobic004G045400--Sobic001G361600 Sobic002G040900 Sobic002G040900 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic008G127933 Sobic008G127933 Sobic008G128066--Sobic008G127933 Sobic007G204700 Sobic007G204700 Sobic008G128066--Sobic007G204700 Sobic008G128200 Sobic008G128200 Sobic008G128066--Sobic008G128200 Sobic008G128066--Sobic006G078900 Sobic003G364200 Sobic003G364200 Sobic008G128066--Sobic003G364200 Sobic008G128066--Sobic002G093700 Sobic005G066100 Sobic005G066100 Sobic008G128066--Sobic005G066100 Sobic002G425000 Sobic002G425000 Sobic008G128066--Sobic002G425000 Sobic008G128066--Sobic001G237900 Sobic009G209500--Sobic001G487400 Sobic009G209500--Sobic002G125000 Sobic009G209500--Sobic006G019200 Sobic009G209500--Sobic002G093700 Sobic009G209500--Sobic001G054500 Sobic009G209500--Sobic004G045400 Sobic003G155600 Sobic003G155600 Sobic009G209500--Sobic003G155600 Sobic009G209500--Sobic008G144600 Sobic009G209500--Sobic002G042000 Sobic001G340400--Sobic001G039200 Sobic001G340400--Sobic008G144600 Sobic001G340400--Sobic001G487400 Sobic001G348300 Sobic001G348300 Sobic001G340400--Sobic001G348300 Sobic001G340400--Sobic006G019200 Sobic001G340400--Sobic005G014000 Sobic001G340400--Sobic006G150700 Sobic001G340400--Sobic002G093700 Sobic001G176300 Sobic001G176300 Sobic001G340400--Sobic001G176300 Sobic007G144501--Sobic001G256200 Sobic007G144501--Sobic002G042000 Sobic007G144501--Sobic002G040900 Sobic007G144501--Sobic002G093700 Sobic007G144501--Sobic001G054500 Sobic007G144501--Sobic004G045400 Sobic007G144501--Sobic002G115025 Sobic007G144501--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic007G144501--Sobic006G101300 Sobic001G256200--Sobic002G040900 Sobic001G256200--Sobic001G054500 Sobic001G256200--Sobic002G042000 Sobic001G256200--Sobic002G115025 Sobic004G148100 Sobic004G148100 Sobic001G256200--Sobic004G148100 Sobic001G256200--Sobic007G144501 Sobic006G113500 Sobic006G113500 Sobic001G256200--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic001G256200--Sobic009G009700 Sobic001G256200--Sobic006G234900
Octagon: transcription factors


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