Gene annotation
Transcriptome id Sobic.005G014000.1
Synonym WRKY54, Sb05g001200, ATWRKY54
Functional annotation WRKY64, expressed
UniProt C5Y3H8
Pfam PF03106
Panther DB PTHR31282 PTHR31282:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G40750 : WRKY DNA-binding protein 54
RAP-DB (Rice) LOC_Os12g02450.1 : WRKY64, expressed
MaizeGDB (Corn) Zm00025a033315
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G019200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR4 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
2 Sobic.001G039200 expressed protein -
3 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.001G237900 expansin precursor, putative, expressed -
5 Sobic.010G226400 expressed protein -
6 Sobic.002G093700 Jacalin-like lectin domain containing protein, putative, expressed -
7 Sobic.001G487400 expressed protein -
8 Sobic.001G340400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@leucoanthocyanidin dioxygenase, putative, expressed -
9 Sobic.010G003600 LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.009G035300 expressed protein -
11 Sobic.002G124500 expansin precursor, putative, expressed -
12 Sobic.001G063200 VQ domain containing protein, putative, expressed -
13 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.008G128066 - -
15 Sobic.010G063000 - -
16 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G348300 expressed protein -
18 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
19 Sobic.009G209500 RING/U-box superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
20 Sobic.006G078900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -


Gene co-expression network
sample Sobic005G014000 Sobic005G014000 Sobic006G019200 Sobic006G019200 Sobic005G014000--Sobic006G019200 Sobic001G039200 Sobic001G039200 Sobic005G014000--Sobic001G039200 Sobic008G144600 Sobic008G144600 Sobic005G014000--Sobic008G144600 Sobic001G237900 Sobic001G237900 Sobic005G014000--Sobic001G237900 Sobic010G226400 Sobic010G226400 Sobic005G014000--Sobic010G226400 Sobic002G093700 Sobic002G093700 Sobic005G014000--Sobic002G093700 Sobic001G487400 Sobic001G487400 Sobic005G014000--Sobic001G487400 Sobic001G340400 Sobic001G340400 Sobic005G014000--Sobic001G340400 Sobic010G003600 Sobic010G003600 Sobic005G014000--Sobic010G003600 Sobic006G019200--Sobic005G014000 Sobic006G019200--Sobic002G093700 Sobic006G019200--Sobic001G487400 Sobic006G019200--Sobic008G144600 Sobic009G209500 Sobic009G209500 Sobic006G019200--Sobic009G209500 Sobic006G019200--Sobic001G340400 Sobic006G019200--Sobic001G237900 Sobic002G125000 Sobic002G125000 Sobic006G019200--Sobic002G125000 Sobic002G124500 Sobic002G124500 Sobic006G019200--Sobic002G124500 Sobic001G039200--Sobic001G340400 Sobic006G150700 Sobic006G150700 Sobic001G039200--Sobic006G150700 Sobic001G039200--Sobic008G144600 Sobic001G176300 Sobic001G176300 Sobic001G039200--Sobic001G176300 Sobic001G039200--Sobic005G014000 Sobic003G053300 Sobic003G053300 Sobic001G039200--Sobic003G053300 Sobic001G348300 Sobic001G348300 Sobic001G039200--Sobic001G348300 Sobic005G063300 Sobic005G063300 Sobic001G039200--Sobic005G063300 Sobic009G035300 Sobic009G035300 Sobic001G039200--Sobic009G035300 Sobic008G144600--Sobic001G487400 Sobic008G144600--Sobic006G150700 Sobic002G213600 Sobic002G213600 Sobic008G144600--Sobic002G213600 Sobic003G016100 Sobic003G016100 Sobic008G144600--Sobic003G016100 Sobic003G363900 Sobic003G363900 Sobic008G144600--Sobic003G363900 Sobic008G144600--Sobic001G039200 Sobic008G144600--Sobic001G340400 Sobic003G079400 Sobic003G079400 Sobic008G144600--Sobic003G079400 Sobic008G144600--Sobic002G093700 Sobic001G238400 Sobic001G238400 Sobic001G237900--Sobic001G238400 Sobic010G158500 Sobic010G158500 Sobic001G237900--Sobic010G158500 Sobic001G237900--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G237900--Sobic006G158400 Sobic002G425000 Sobic002G425000 Sobic001G237900--Sobic002G425000 Sobic004G202400 Sobic004G202400 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic010G063000 Sobic010G063000 Sobic001G237900--Sobic010G063000 Sobic001G237900--Sobic002G213600 Sobic002G044800 Sobic002G044800 Sobic010G226400--Sobic002G044800 Sobic010G226400--Sobic010G063000 Sobic010G226400--Sobic005G014000 Sobic010G226400--Sobic010G158500 Sobic006G078900 Sobic006G078900 Sobic010G226400--Sobic006G078900 Sobic010G226400--Sobic008G144600 Sobic002G125700 Sobic002G125700 Sobic010G226400--Sobic002G125700 Sobic007G204700 Sobic007G204700 Sobic010G226400--Sobic007G204700 Sobic003G280400 Sobic003G280400 Sobic010G226400--Sobic003G280400 Sobic002G093700--Sobic001G487400 Sobic008G128066 Sobic008G128066 Sobic002G093700--Sobic008G128066 Sobic002G093700--Sobic006G019200 Sobic007G144501 Sobic007G144501 Sobic002G093700--Sobic007G144501 Sobic006G234900 Sobic006G234900 Sobic002G093700--Sobic006G234900 Sobic002G115025 Sobic002G115025 Sobic002G093700--Sobic002G115025 Sobic004G045400 Sobic004G045400 Sobic002G093700--Sobic004G045400 Sobic001G256200 Sobic001G256200 Sobic002G093700--Sobic001G256200 Sobic002G093700--Sobic006G078900 Sobic001G487400--Sobic008G144600 Sobic001G487400--Sobic002G093700 Sobic001G487400--Sobic006G019200 Sobic001G487400--Sobic004G045400 Sobic001G487400--Sobic008G128066 Sobic001G487400--Sobic009G209500 Sobic001G487400--Sobic001G340400 Sobic001G487400--Sobic007G144501 Sobic001G487400--Sobic001G256200 Sobic001G340400--Sobic001G039200 Sobic001G340400--Sobic008G144600 Sobic001G340400--Sobic001G487400 Sobic001G340400--Sobic001G348300 Sobic001G340400--Sobic006G019200 Sobic001G340400--Sobic005G014000 Sobic001G340400--Sobic006G150700 Sobic001G340400--Sobic002G093700 Sobic001G340400--Sobic001G176300 Sobic005G066100 Sobic005G066100 Sobic010G003600--Sobic005G066100 Sobic010G161800 Sobic010G161800 Sobic010G003600--Sobic010G161800 Sobic010G003600--Sobic001G237900 Sobic005G066432 Sobic005G066432 Sobic010G003600--Sobic005G066432 Sobic001G238300 Sobic001G238300 Sobic010G003600--Sobic001G238300 Sobic001G301300 Sobic001G301300 Sobic010G003600--Sobic001G301300 Sobic010G234400 Sobic010G234400 Sobic010G003600--Sobic010G234400 Sobic010G003600--Sobic008G128066 Sobic010G003600--Sobic002G425000
Octagon: transcription factors


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