Gene annotation
Transcriptome id Sobic.001G348300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QMQ6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g27690.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G053700 auxin-induced protein 5NG4, putative, expressed -
2 Sobic.001G176300 cytochrome P450, putative, expressed -
3 Sobic.001G348500 expressed protein -
4 Sobic.001G039200 expressed protein -
5 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.002G425000 VQ domain containing protein, putative, expressed -
7 Sobic.010G161800 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G340400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@leucoanthocyanidin dioxygenase, putative, expressed -
9 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
10 Sobic.008G128066 - -
11 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
13 Sobic.002G377700 caltractin, putative, expressed -
14 Sobic.010G234400 O-methyltransferase, putative, expressed -
15 Sobic.004G009400 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
16 Sobic.005G014000 WRKY64, expressed -
17 Sobic.010G003600 LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.002G261500 AIR12, putative, expressed -
20 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G348300 Sobic001G348300 Sobic002G053700 Sobic002G053700 Sobic001G348300--Sobic002G053700 Sobic001G176300 Sobic001G176300 Sobic001G348300--Sobic001G176300 Sobic001G348500 Sobic001G348500 Sobic001G348300--Sobic001G348500 Sobic001G039200 Sobic001G039200 Sobic001G348300--Sobic001G039200 Sobic005G063400 Sobic005G063400 Sobic001G348300--Sobic005G063400 Sobic002G425000 Sobic002G425000 Sobic001G348300--Sobic002G425000 Sobic010G161800 Sobic010G161800 Sobic001G348300--Sobic010G161800 Sobic001G340400 Sobic001G340400 Sobic001G348300--Sobic001G340400 Sobic006G122800 Sobic006G122800 Sobic001G348300--Sobic006G122800 Sobic006G277700 Sobic006G277700 Sobic002G053700--Sobic006G277700 Sobic002G053700--Sobic005G063400 Sobic003G053600 Sobic003G053600 Sobic002G053700--Sobic003G053600 Sobic001G379400 Sobic001G379400 Sobic002G053700--Sobic001G379400 Sobic002G053700--Sobic006G122800 Sobic001G301300 Sobic001G301300 Sobic002G053700--Sobic001G301300 Sobic006G174300 Sobic006G174300 Sobic002G053700--Sobic006G174300 Sobic002G050300 Sobic002G050300 Sobic002G053700--Sobic002G050300 Sobic004G009400 Sobic004G009400 Sobic002G053700--Sobic004G009400 Sobic001G176300--Sobic001G039200 Sobic001G176300--Sobic001G348300 Sobic001G176300--Sobic001G348500 Sobic006G150700 Sobic006G150700 Sobic001G176300--Sobic006G150700 Sobic003G053300 Sobic003G053300 Sobic001G176300--Sobic003G053300 Sobic009G088900 Sobic009G088900 Sobic001G176300--Sobic009G088900 Sobic009G035300 Sobic009G035300 Sobic001G176300--Sobic009G035300 Sobic001G176300--Sobic001G340400 Sobic005G073000 Sobic005G073000 Sobic001G176300--Sobic005G073000 Sobic001G348500--Sobic001G348300 Sobic002G183600 Sobic002G183600 Sobic001G348500--Sobic002G183600 Sobic005G005600 Sobic005G005600 Sobic001G348500--Sobic005G005600 Sobic001G348500--Sobic001G176300 Sobic001G238400 Sobic001G238400 Sobic001G348500--Sobic001G238400 Sobic009G217700 Sobic009G217700 Sobic001G348500--Sobic009G217700 Sobic001G449600 Sobic001G449600 Sobic001G348500--Sobic001G449600 Sobic005G213500 Sobic005G213500 Sobic001G348500--Sobic005G213500 Sobic008G157800 Sobic008G157800 Sobic001G348500--Sobic008G157800 Sobic001G039200--Sobic001G340400 Sobic001G039200--Sobic006G150700 Sobic008G144600 Sobic008G144600 Sobic001G039200--Sobic008G144600 Sobic001G039200--Sobic001G176300 Sobic005G014000 Sobic005G014000 Sobic001G039200--Sobic005G014000 Sobic001G039200--Sobic003G053300 Sobic001G039200--Sobic001G348300 Sobic005G063300 Sobic005G063300 Sobic001G039200--Sobic005G063300 Sobic001G039200--Sobic009G035300 Sobic005G063400--Sobic003G053600 Sobic005G063400--Sobic002G053700 Sobic005G063400--Sobic004G009400 Sobic007G057400 Sobic007G057400 Sobic005G063400--Sobic007G057400 Sobic005G063400--Sobic006G122800 Sobic002G101400 Sobic002G101400 Sobic005G063400--Sobic002G101400 Sobic005G063400--Sobic006G277700 Sobic009G088500 Sobic009G088500 Sobic005G063400--Sobic009G088500 Sobic005G063400--Sobic006G174300 Sobic001G238300 Sobic001G238300 Sobic002G425000--Sobic001G238300 Sobic002G261500 Sobic002G261500 Sobic002G425000--Sobic002G261500 Sobic008G127933 Sobic008G127933 Sobic002G425000--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic002G425000--Sobic001G237900 Sobic006G260200 Sobic006G260200 Sobic002G425000--Sobic006G260200 Sobic004G297900 Sobic004G297900 Sobic002G425000--Sobic004G297900 SobicK026900 SobicK026900 Sobic002G425000--SobicK026900 Sobic003G053400 Sobic003G053400 Sobic002G425000--Sobic003G053400 Sobic002G425000--Sobic006G122800 Sobic010G161800--Sobic006G122800 Sobic010G161800--Sobic002G425000 Sobic010G161800--Sobic005G063400 Sobic010G161800--Sobic006G260200 Sobic010G161800--Sobic002G053700 Sobic003G384700 Sobic003G384700 Sobic010G161800--Sobic003G384700 Sobic005G072900 Sobic005G072900 Sobic010G161800--Sobic005G072900 Sobic010G161800--Sobic006G174300 Sobic007G050200 Sobic007G050200 Sobic010G161800--Sobic007G050200 Sobic001G340400--Sobic001G039200 Sobic001G340400--Sobic008G144600 Sobic001G487400 Sobic001G487400 Sobic001G340400--Sobic001G487400 Sobic001G340400--Sobic001G348300 Sobic006G019200 Sobic006G019200 Sobic001G340400--Sobic006G019200 Sobic001G340400--Sobic005G014000 Sobic001G340400--Sobic006G150700 Sobic002G093700 Sobic002G093700 Sobic001G340400--Sobic002G093700 Sobic001G340400--Sobic001G176300 Sobic006G122800--Sobic003G384700 Sobic002G042200 Sobic002G042200 Sobic006G122800--Sobic002G042200 Sobic006G122800--Sobic002G425000 Sobic006G122800--Sobic002G053700 Sobic006G122800--Sobic005G063400 Sobic006G122800--Sobic010G161800 Sobic006G122800--Sobic006G260200 Sobic006G122800--Sobic006G174300 Sobic006G251400 Sobic006G251400 Sobic006G122800--Sobic006G251400
Octagon: transcription factors


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