Gene annotation
Transcriptome id Sobic.001G348500.1
Synonym Sb01g033370
Functional annotation expressed protein
UniProt C5WXM9
Pfam -
Panther DB PTHR33348 PTHR33348:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66815 : -
RAP-DB (Rice) LOC_Os03g27690.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G348300 expressed protein -
2 Sobic.002G183600 L-ascorbate oxidase precursor, putative, expressed -
3 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
4 Sobic.001G176300 cytochrome P450, putative, expressed -
5 Sobic.001G238400 expansin precursor, putative, expressed -
6 Sobic.009G217700 - -
7 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
8 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
9 Sobic.008G157800 BURP domain containing protein, expressed -
10 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
11 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
12 Sobic.007G063500 plant protein of unknown function domain containing protein, expressed -
13 Sobic.007G065900 Cupin domain containing protein, expressed -
14 Sobic.004G292001 - -
15 Sobic.001G237900 expansin precursor, putative, expressed -
16 Sobic.002G425000 VQ domain containing protein, putative, expressed -
17 Sobic.005G073000 stress responsive protein, putative, expressed -
18 Sobic.004G203301 - -
19 Sobic.001G508600 Up-reguralion under heat(PubMedID : 24916767)@-(PubMedID : 29751546)@zinc finger family protein, putative, expressed -
20 Sobic.010G003600 LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic001G348500 Sobic001G348500 Sobic001G348300 Sobic001G348300 Sobic001G348500--Sobic001G348300 Sobic002G183600 Sobic002G183600 Sobic001G348500--Sobic002G183600 Sobic005G005600 Sobic005G005600 Sobic001G348500--Sobic005G005600 Sobic001G176300 Sobic001G176300 Sobic001G348500--Sobic001G176300 Sobic001G238400 Sobic001G238400 Sobic001G348500--Sobic001G238400 Sobic009G217700 Sobic009G217700 Sobic001G348500--Sobic009G217700 Sobic001G449600 Sobic001G449600 Sobic001G348500--Sobic001G449600 Sobic005G213500 Sobic005G213500 Sobic001G348500--Sobic005G213500 Sobic008G157800 Sobic008G157800 Sobic001G348500--Sobic008G157800 Sobic002G053700 Sobic002G053700 Sobic001G348300--Sobic002G053700 Sobic001G348300--Sobic001G176300 Sobic001G348300--Sobic001G348500 Sobic001G039200 Sobic001G039200 Sobic001G348300--Sobic001G039200 Sobic005G063400 Sobic005G063400 Sobic001G348300--Sobic005G063400 Sobic002G425000 Sobic002G425000 Sobic001G348300--Sobic002G425000 Sobic010G161800 Sobic010G161800 Sobic001G348300--Sobic010G161800 Sobic001G340400 Sobic001G340400 Sobic001G348300--Sobic001G340400 Sobic006G122800 Sobic006G122800 Sobic001G348300--Sobic006G122800 Sobic002G183600--Sobic008G157800 Sobic002G183600--Sobic001G348500 Sobic004G292001 Sobic004G292001 Sobic002G183600--Sobic004G292001 Sobic002G183600--Sobic005G213500 Sobic002G183600--Sobic005G005600 Sobic007G030400 Sobic007G030400 Sobic002G183600--Sobic007G030400 Sobic004G319100 Sobic004G319100 Sobic002G183600--Sobic004G319100 Sobic004G061701 Sobic004G061701 Sobic002G183600--Sobic004G061701 Sobic006G019200 Sobic006G019200 Sobic002G183600--Sobic006G019200 Sobic003G319700 Sobic003G319700 Sobic005G005600--Sobic003G319700 Sobic005G005600--Sobic001G449600 Sobic006G143400 Sobic006G143400 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G005600--Sobic005G213500 Sobic007G166000 Sobic007G166000 Sobic005G005600--Sobic007G166000 Sobic003G364000 Sobic003G364000 Sobic005G005600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic005G005600--Sobic001G433900 Sobic009G139700 Sobic009G139700 Sobic005G005600--Sobic009G139700 Sobic001G176300--Sobic001G039200 Sobic001G176300--Sobic001G348300 Sobic001G176300--Sobic001G348500 Sobic006G150700 Sobic006G150700 Sobic001G176300--Sobic006G150700 Sobic003G053300 Sobic003G053300 Sobic001G176300--Sobic003G053300 Sobic009G088900 Sobic009G088900 Sobic001G176300--Sobic009G088900 Sobic009G035300 Sobic009G035300 Sobic001G176300--Sobic009G035300 Sobic001G176300--Sobic001G340400 Sobic005G073000 Sobic005G073000 Sobic001G176300--Sobic005G073000 Sobic001G304100 Sobic001G304100 Sobic001G238400--Sobic001G304100 Sobic001G237900 Sobic001G237900 Sobic001G238400--Sobic001G237900 Sobic003G007600 Sobic003G007600 Sobic001G238400--Sobic003G007600 Sobic009G188000 Sobic009G188000 Sobic001G238400--Sobic009G188000 Sobic004G318700 Sobic004G318700 Sobic001G238400--Sobic004G318700 Sobic003G299300 Sobic003G299300 Sobic001G238400--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G238400--Sobic004G292900 Sobic006G234800 Sobic006G234800 Sobic001G238400--Sobic006G234800 Sobic006G132900 Sobic006G132900 Sobic001G238400--Sobic006G132900 Sobic009G217700--Sobic001G449600 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic003G255200 Sobic003G255200 Sobic009G217700--Sobic003G255200 Sobic009G217700--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic009G217700--Sobic004G107700 Sobic009G217700--Sobic005G005600 Sobic002G034800 Sobic002G034800 Sobic009G217700--Sobic002G034800 Sobic005G013600 Sobic005G013600 Sobic009G217700--Sobic005G013600 Sobic001G449600--Sobic009G217700 Sobic001G449600--Sobic003G255200 Sobic001G449600--Sobic005G005600 Sobic001G449600--Sobic003G319700 Sobic001G449600--Sobic007G166000 Sobic002G125700 Sobic002G125700 Sobic001G449600--Sobic002G125700 Sobic001G449600--Sobic002G034800 Sobic003G255500 Sobic003G255500 Sobic001G449600--Sobic003G255500 Sobic009G016300 Sobic009G016300 Sobic001G449600--Sobic009G016300 Sobic010G156500 Sobic010G156500 Sobic005G213500--Sobic010G156500 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic003G364300 Sobic003G364300 Sobic005G213500--Sobic003G364300 Sobic005G213500--Sobic006G132900 Sobic002G338500 Sobic002G338500 Sobic005G213500--Sobic002G338500 Sobic010G043900 Sobic010G043900 Sobic005G213500--Sobic010G043900 Sobic010G259500 Sobic010G259500 Sobic005G213500--Sobic010G259500 Sobic005G213500--Sobic005G005600 Sobic008G157800--Sobic004G061701 Sobic007G065900 Sobic007G065900 Sobic008G157800--Sobic007G065900 Sobic004G023500 Sobic004G023500 Sobic008G157800--Sobic004G023500 Sobic008G039501 Sobic008G039501 Sobic008G157800--Sobic008G039501 Sobic003G344050 Sobic003G344050 Sobic008G157800--Sobic003G344050 Sobic002G150100 Sobic002G150100 Sobic008G157800--Sobic002G150100 Sobic007G108200 Sobic007G108200 Sobic008G157800--Sobic007G108200
Octagon: transcription factors


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