Gene annotation
Transcriptome id Sobic.001G508600.1
Synonym Sodium Proton Exchanger 7, Sb01g047480, SbNHE7
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
- (PubMedID : 29751546)
zinc finger family protein, putative, expressed
UniProt C5WYV1
Pfam PF17123 PF14624 PF13519
Panther DB PTHR10579 PTHR10579:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G60710 : Zinc finger (C3HC4-type RING finger) family protein
RAP-DB (Rice) LOC_Os08g03270.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006669 , Zm00025a000570
Brachypodium PNT78231 , KQJ96994 , PNT78325
Barley HORVU4Hr1G084370.1 , HORVU4Hr1G084330.1 , HORVU4Hr1G084380.1 , HORVU4Hr1G084380.2 , HORVU4Hr1G086310.1 , HORVU1Hr1G092690.1
Wheat TraesCS4D02G351600 , TraesCS1D02G433500 , TraesCS4B02G344200 , TraesCS7A02G423300 , TraesCS5A02G513000 , TraesCS4D02G339300 , TraesCS1A02G421500 , TraesCS2B02G377900 , TraesCS2A02G358400 , TraesCS2D02G357400
Populus -


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cDNA sequences
Sobic.001G508600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
2 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
3 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.009G217700 - -
5 Sobic.004G259432 - -
6 Sobic.006G143400 expressed protein -
7 Sobic.005G013600 WRKY46, expressed -
8 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
9 Sobic.010G063000 - -
10 Sobic.003G202500 methyltransferase, putative, expressed -
11 Sobic.003G255200 expressed protein -
12 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
13 Sobic.003G363900 glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
15 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
16 Sobic.003G255500 expressed protein -
17 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
18 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
19 Sobic.003G016100 expressed protein -
20 Sobic.001G063200 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G508600 Sobic001G508600 Sobic001G449600 Sobic001G449600 Sobic001G508600--Sobic001G449600 Sobic005G005600 Sobic005G005600 Sobic001G508600--Sobic005G005600 Sobic001G161500 Sobic001G161500 Sobic001G508600--Sobic001G161500 Sobic009G217700 Sobic009G217700 Sobic001G508600--Sobic009G217700 Sobic004G259432 Sobic004G259432 Sobic001G508600--Sobic004G259432 Sobic006G143400 Sobic006G143400 Sobic001G508600--Sobic006G143400 Sobic005G013600 Sobic005G013600 Sobic001G508600--Sobic005G013600 Sobic006G132900 Sobic006G132900 Sobic001G508600--Sobic006G132900 Sobic010G063000 Sobic010G063000 Sobic001G508600--Sobic010G063000 Sobic001G449600--Sobic009G217700 Sobic003G255200 Sobic003G255200 Sobic001G449600--Sobic003G255200 Sobic001G449600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic001G449600--Sobic003G319700 Sobic007G166000 Sobic007G166000 Sobic001G449600--Sobic007G166000 Sobic002G125700 Sobic002G125700 Sobic001G449600--Sobic002G125700 Sobic002G034800 Sobic002G034800 Sobic001G449600--Sobic002G034800 Sobic003G255500 Sobic003G255500 Sobic001G449600--Sobic003G255500 Sobic009G016300 Sobic009G016300 Sobic001G449600--Sobic009G016300 Sobic005G005600--Sobic003G319700 Sobic005G005600--Sobic001G449600 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G213500 Sobic005G213500 Sobic005G005600--Sobic005G213500 Sobic005G005600--Sobic007G166000 Sobic003G364000 Sobic003G364000 Sobic005G005600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic005G005600--Sobic001G433900 Sobic009G139700 Sobic009G139700 Sobic005G005600--Sobic009G139700 Sobic001G416200 Sobic001G416200 Sobic001G161500--Sobic001G416200 Sobic004G349125 Sobic004G349125 Sobic001G161500--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G161500--Sobic001G302600 Sobic004G318700 Sobic004G318700 Sobic001G161500--Sobic004G318700 Sobic001G304100 Sobic001G304100 Sobic001G161500--Sobic001G304100 Sobic004G042000 Sobic004G042000 Sobic001G161500--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G161500--Sobic009G035300 Sobic002G213600 Sobic002G213600 Sobic001G161500--Sobic002G213600 Sobic006G197100 Sobic006G197100 Sobic001G161500--Sobic006G197100 Sobic009G217700--Sobic001G449600 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic009G217700--Sobic003G255200 Sobic009G217700--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic009G217700--Sobic004G107700 Sobic009G217700--Sobic005G005600 Sobic009G217700--Sobic002G034800 Sobic009G217700--Sobic005G013600 Sobic002G418400 Sobic002G418400 Sobic004G259432--Sobic002G418400 Sobic007G151100 Sobic007G151100 Sobic004G259432--Sobic007G151100 Sobic004G159400 Sobic004G159400 Sobic004G259432--Sobic004G159400 Sobic004G340900 Sobic004G340900 Sobic004G259432--Sobic004G340900 Sobic005G018700 Sobic005G018700 Sobic004G259432--Sobic005G018700 Sobic009G188000 Sobic009G188000 Sobic004G259432--Sobic009G188000 Sobic003G037800 Sobic003G037800 Sobic004G259432--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic004G259432--Sobic002G245100 Sobic005G168100 Sobic005G168100 Sobic004G259432--Sobic005G168100 Sobic006G143400--Sobic005G005600 Sobic003G041600 Sobic003G041600 Sobic006G143400--Sobic003G041600 Sobic009G159400 Sobic009G159400 Sobic006G143400--Sobic009G159400 Sobic010G259600 Sobic010G259600 Sobic006G143400--Sobic010G259600 Sobic008G185400 Sobic008G185400 Sobic006G143400--Sobic008G185400 Sobic004G075000 Sobic004G075000 Sobic006G143400--Sobic004G075000 Sobic003G364300 Sobic003G364300 Sobic006G143400--Sobic003G364300 Sobic006G143400--Sobic007G166000 Sobic006G143400--Sobic001G449600 Sobic005G013600--Sobic009G217700 Sobic005G013600--Sobic001G449600 Sobic005G013600--Sobic009G139700 Sobic007G005700 Sobic007G005700 Sobic005G013600--Sobic007G005700 Sobic005G013600--Sobic003G255200 Sobic005G013600--Sobic007G166000 Sobic005G013600--Sobic003G364000 Sobic005G013600--Sobic005G005600 Sobic003G202000 Sobic003G202000 Sobic005G013600--Sobic003G202000 Sobic001G502400 Sobic001G502400 Sobic006G132900--Sobic001G502400 Sobic006G234800 Sobic006G234800 Sobic006G132900--Sobic006G234800 Sobic005G107900 Sobic005G107900 Sobic006G132900--Sobic005G107900 Sobic001G313600 Sobic001G313600 Sobic006G132900--Sobic001G313600 Sobic002G188900 Sobic002G188900 Sobic006G132900--Sobic002G188900 Sobic006G132900--Sobic001G304100 Sobic001G435000 Sobic001G435000 Sobic006G132900--Sobic001G435000 Sobic004G229800 Sobic004G229800 Sobic006G132900--Sobic004G229800 Sobic001G238400 Sobic001G238400 Sobic006G132900--Sobic001G238400 Sobic006G125100 Sobic006G125100 Sobic010G063000--Sobic006G125100 Sobic010G063000--Sobic002G125700 Sobic010G063000--Sobic002G213600 Sobic001G237900 Sobic001G237900 Sobic010G063000--Sobic001G237900 Sobic001G503100 Sobic001G503100 Sobic010G063000--Sobic001G503100 Sobic010G001000 Sobic010G001000 Sobic010G063000--Sobic010G001000 Sobic010G063000--Sobic001G161500 Sobic001G318500 Sobic001G318500 Sobic010G063000--Sobic001G318500 Sobic001G325400 Sobic001G325400 Sobic010G063000--Sobic001G325400
Octagon: transcription factors


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