Gene annotation
Transcriptome id Sobic.003G202500.2
Synonym Sb03g026460
Functional annotation methyltransferase, putative, expressed
UniProt A0A1W0VY82
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF725
NCBI CDD KOG3010; Methyltransferase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G22530 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g40660.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G202500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G016100 expressed protein -
2 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
3 Sobic.008G106700 isoflavone reductase, putative, expressed -
4 Sobic.006G136800 "shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
5 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
6 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
7 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
8 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
9 Sobic.009G179900 OsCML9 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
10 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
12 Sobic.002G329800 expressed protein -
13 Sobic.001G014000 P21-Rho-binding domain containing protein, putative, expressed -
14 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
15 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
16 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
17 Sobic.001G432000 LYR motif containing protein, putative, expressed -
18 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
19 Sobic.004G205100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
20 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)


Gene co-expression network
sample Sobic003G202500 Sobic003G202500 Sobic003G016100 Sobic003G016100 Sobic003G202500--Sobic003G016100 Sobic010G063801 Sobic010G063801 Sobic003G202500--Sobic010G063801 Sobic008G106700 Sobic008G106700 Sobic003G202500--Sobic008G106700 Sobic006G136800 Sobic006G136800 Sobic003G202500--Sobic006G136800 Sobic003G084400 Sobic003G084400 Sobic003G202500--Sobic003G084400 Sobic001G247600 Sobic001G247600 Sobic003G202500--Sobic001G247600 Sobic003G436700 Sobic003G436700 Sobic003G202500--Sobic003G436700 Sobic001G508900 Sobic001G508900 Sobic003G202500--Sobic001G508900 Sobic009G179900 Sobic009G179900 Sobic003G202500--Sobic009G179900 Sobic002G213600 Sobic002G213600 Sobic003G016100--Sobic002G213600 Sobic004G046200 Sobic004G046200 Sobic003G016100--Sobic004G046200 Sobic010G067400 Sobic010G067400 Sobic003G016100--Sobic010G067400 Sobic009G187200 Sobic009G187200 Sobic003G016100--Sobic009G187200 Sobic004G042000 Sobic004G042000 Sobic003G016100--Sobic004G042000 Sobic003G079400 Sobic003G079400 Sobic003G016100--Sobic003G079400 Sobic003G016100--Sobic003G084400 Sobic003G316000 Sobic003G316000 Sobic003G016100--Sobic003G316000 Sobic004G318700 Sobic004G318700 Sobic003G016100--Sobic004G318700 Sobic002G081600 Sobic002G081600 Sobic010G063801--Sobic002G081600 Sobic002G200600 Sobic002G200600 Sobic010G063801--Sobic002G200600 Sobic006G116700 Sobic006G116700 Sobic010G063801--Sobic006G116700 Sobic010G251600 Sobic010G251600 Sobic010G063801--Sobic010G251600 Sobic001G130301 Sobic001G130301 Sobic010G063801--Sobic001G130301 Sobic010G063801--Sobic003G436700 Sobic009G105700 Sobic009G105700 Sobic010G063801--Sobic009G105700 Sobic009G215200 Sobic009G215200 Sobic010G063801--Sobic009G215200 Sobic001G374700 Sobic001G374700 Sobic010G063801--Sobic001G374700 Sobic008G106700--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic008G106700--Sobic001G500000 Sobic006G044100 Sobic006G044100 Sobic008G106700--Sobic006G044100 Sobic008G106700--Sobic003G084400 Sobic008G106700--Sobic003G079400 Sobic009G183400 Sobic009G183400 Sobic008G106700--Sobic009G183400 Sobic008G106700--Sobic009G179900 Sobic001G139100 Sobic001G139100 Sobic008G106700--Sobic001G139100 Sobic006G199800 Sobic006G199800 Sobic008G106700--Sobic006G199800 Sobic006G136800--Sobic004G046200 Sobic006G136800--Sobic002G081600 Sobic006G136800--Sobic003G436700 Sobic001G295200 Sobic001G295200 Sobic006G136800--Sobic001G295200 Sobic001G036900 Sobic001G036900 Sobic006G136800--Sobic001G036900 Sobic004G205100 Sobic004G205100 Sobic006G136800--Sobic004G205100 Sobic004G340900 Sobic004G340900 Sobic006G136800--Sobic004G340900 Sobic001G389000 Sobic001G389000 Sobic006G136800--Sobic001G389000 Sobic006G136800--Sobic001G500000 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic001G304100 Sobic001G304100 Sobic003G084400--Sobic001G304100 Sobic001G367600 Sobic001G367600 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic007G184600 Sobic007G184600 Sobic001G247600--Sobic007G184600 Sobic001G247600--Sobic002G200600 Sobic004G225900 Sobic004G225900 Sobic001G247600--Sobic004G225900 Sobic009G077800 Sobic009G077800 Sobic001G247600--Sobic009G077800 Sobic003G417800 Sobic003G417800 Sobic001G247600--Sobic003G417800 Sobic001G119400 Sobic001G119400 Sobic001G247600--Sobic001G119400 Sobic009G139400 Sobic009G139400 Sobic001G247600--Sobic009G139400 Sobic001G247600--Sobic004G205100 Sobic001G177800 Sobic001G177800 Sobic001G247600--Sobic001G177800 Sobic004G008400 Sobic004G008400 Sobic003G436700--Sobic004G008400 Sobic003G436700--Sobic006G116700 Sobic009G050300 Sobic009G050300 Sobic003G436700--Sobic009G050300 Sobic003G436700--Sobic010G251600 Sobic006G067800 Sobic006G067800 Sobic003G436700--Sobic006G067800 Sobic007G178600 Sobic007G178600 Sobic003G436700--Sobic007G178600 Sobic003G436700--Sobic002G081600 Sobic003G436700--Sobic009G215200 Sobic002G379500 Sobic002G379500 Sobic003G436700--Sobic002G379500 Sobic001G508900--Sobic007G178600 Sobic002G414700 Sobic002G414700 Sobic001G508900--Sobic002G414700 Sobic001G175300 Sobic001G175300 Sobic001G508900--Sobic001G175300 Sobic001G508900--Sobic010G251600 Sobic001G508900--Sobic003G436700 Sobic010G206200 Sobic010G206200 Sobic001G508900--Sobic010G206200 Sobic003G078200 Sobic003G078200 Sobic001G508900--Sobic003G078200 Sobic004G271400 Sobic004G271400 Sobic001G508900--Sobic004G271400 Sobic001G508900--Sobic004G008400 Sobic009G179900--Sobic008G106700 Sobic003G062600 Sobic003G062600 Sobic009G179900--Sobic003G062600 Sobic003G255200 Sobic003G255200 Sobic009G179900--Sobic003G255200 Sobic009G179900--Sobic006G044100 Sobic004G176600 Sobic004G176600 Sobic009G179900--Sobic004G176600 Sobic001G082600 Sobic001G082600 Sobic009G179900--Sobic001G082600 Sobic009G179900--Sobic004G046200 Sobic002G034800 Sobic002G034800 Sobic009G179900--Sobic002G034800 Sobic009G179900--Sobic003G417800
Octagon: transcription factors


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