Gene annotation
Transcriptome id Sobic.002G329800.1
Synonym Sb02g035630
Functional annotation expressed protein
UniProt C5XAT6
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32280 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os07g36110.2 : expressed protein
MaizeGDB (Corn) Zm00025a048314
Brachypodium -
Barley -
Wheat TraesCS2B02G239800 , TraesCS2D02G220600 , TraesCS2A02G214800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G203700 hypothetical protein -
2 Sobic.004G203700 ubiquitin family protein, putative, expressed -
3 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
4 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
5 Sobic.010G156500 expressed protein -
6 Sobic.009G231000 - -
7 Sobic.005G183100 sulfotransferase domain containing protein, expressed -
8 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
9 Sobic.010G213700 GDU1, putative, expressed -
10 Sobic.004G259366 - -
11 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.004G301300 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.003G156200 cytochrome P450, putative, expressed -
14 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.003G027400 VQ domain containing protein, putative, expressed -
16 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
17 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
18 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
19 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
20 Sobic.002G034800 - -


Gene co-expression network
sample Sobic002G329800 Sobic002G329800 Sobic002G203700 Sobic002G203700 Sobic002G329800--Sobic002G203700 Sobic004G203700 Sobic004G203700 Sobic002G329800--Sobic004G203700 Sobic002G389400 Sobic002G389400 Sobic002G329800--Sobic002G389400 Sobic003G084400 Sobic003G084400 Sobic002G329800--Sobic003G084400 Sobic010G156500 Sobic010G156500 Sobic002G329800--Sobic010G156500 Sobic009G231000 Sobic009G231000 Sobic002G329800--Sobic009G231000 Sobic005G183100 Sobic005G183100 Sobic002G329800--Sobic005G183100 Sobic009G159400 Sobic009G159400 Sobic002G329800--Sobic009G159400 Sobic010G213700 Sobic010G213700 Sobic002G329800--Sobic010G213700 Sobic003G156200 Sobic003G156200 Sobic002G203700--Sobic003G156200 Sobic003G301600 Sobic003G301600 Sobic002G203700--Sobic003G301600 Sobic004G313100 Sobic004G313100 Sobic002G203700--Sobic004G313100 Sobic002G203700--Sobic005G183100 Sobic002G057900 Sobic002G057900 Sobic002G203700--Sobic002G057900 Sobic001G317000 Sobic001G317000 Sobic002G203700--Sobic001G317000 Sobic002G034800 Sobic002G034800 Sobic002G203700--Sobic002G034800 Sobic002G203700--Sobic002G329800 Sobic002G203700--Sobic010G213700 Sobic003G303100 Sobic003G303100 Sobic004G203700--Sobic003G303100 Sobic002G055700 Sobic002G055700 Sobic004G203700--Sobic002G055700 Sobic002G338500 Sobic002G338500 Sobic004G203700--Sobic002G338500 Sobic001G318500 Sobic001G318500 Sobic004G203700--Sobic001G318500 Sobic003G426400 Sobic003G426400 Sobic004G203700--Sobic003G426400 Sobic003G043600 Sobic003G043600 Sobic004G203700--Sobic003G043600 Sobic003G382600 Sobic003G382600 Sobic004G203700--Sobic003G382600 Sobic002G200600 Sobic002G200600 Sobic004G203700--Sobic002G200600 Sobic001G367600 Sobic001G367600 Sobic004G203700--Sobic001G367600 Sobic001G112200 Sobic001G112200 Sobic002G389400--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic002G389400--Sobic009G184000 Sobic004G171400 Sobic004G171400 Sobic002G389400--Sobic004G171400 Sobic003G367200 Sobic003G367200 Sobic002G389400--Sobic003G367200 Sobic004G321300 Sobic004G321300 Sobic002G389400--Sobic004G321300 Sobic010G225251 Sobic010G225251 Sobic002G389400--Sobic010G225251 Sobic004G336500 Sobic004G336500 Sobic002G389400--Sobic004G336500 Sobic010G166500 Sobic010G166500 Sobic002G389400--Sobic010G166500 Sobic001G138600 Sobic001G138600 Sobic002G389400--Sobic001G138600 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic001G500000 Sobic001G500000 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic004G046200 Sobic004G046200 Sobic003G084400--Sobic004G046200 Sobic001G304100 Sobic001G304100 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic003G364300 Sobic003G364300 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic010G156500--Sobic003G364000 Sobic010G156500--Sobic003G382600 Sobic005G213500 Sobic005G213500 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic002G302500 Sobic002G302500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic010G156500--Sobic009G231000 Sobic009G231000--Sobic003G364300 Sobic010G259600 Sobic010G259600 Sobic009G231000--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic009G231000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic009G231000--Sobic006G039100 Sobic002G125700 Sobic002G125700 Sobic009G231000--Sobic002G125700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic003G297600 Sobic003G297600 Sobic009G231000--Sobic003G297600 Sobic009G231000--Sobic010G156500 Sobic002G366600 Sobic002G366600 Sobic005G183100--Sobic002G366600 Sobic002G415100 Sobic002G415100 Sobic005G183100--Sobic002G415100 Sobic003G255200 Sobic003G255200 Sobic005G183100--Sobic003G255200 Sobic007G025500 Sobic007G025500 Sobic005G183100--Sobic007G025500 Sobic005G183100--Sobic009G231000 Sobic005G183100--Sobic004G046200 Sobic003G062600 Sobic003G062600 Sobic005G183100--Sobic003G062600 Sobic005G183100--Sobic010G259600 Sobic005G183100--Sobic010G213700 Sobic001G038900 Sobic001G038900 Sobic009G159400--Sobic001G038900 Sobic001G435000 Sobic001G435000 Sobic009G159400--Sobic001G435000 Sobic009G159400--Sobic004G321300 Sobic003G345100 Sobic003G345100 Sobic009G159400--Sobic003G345100 Sobic004G208700 Sobic004G208700 Sobic009G159400--Sobic004G208700 Sobic001G140900 Sobic001G140900 Sobic009G159400--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic005G029200 Sobic005G029200 Sobic010G213700--Sobic005G029200 Sobic010G213700--Sobic002G366600 Sobic001G119400 Sobic001G119400 Sobic010G213700--Sobic001G119400 Sobic009G139400 Sobic009G139400 Sobic010G213700--Sobic009G139400 Sobic004G148200 Sobic004G148200 Sobic010G213700--Sobic004G148200 Sobic010G213700--Sobic003G297600 Sobic010G213700--Sobic002G415100 Sobic004G189400 Sobic004G189400 Sobic010G213700--Sobic004G189400 Sobic010G213700--Sobic003G280200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.