Gene annotation
Transcriptome id Sobic.004G259432.1
Synonym -
Functional annotation -
UniProt A0A1Z5RP45
Pfam -
Panther DB PTHR34672 PTHR34672:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41905 : -
RAP-DB (Rice) LOC_Os06g21410.1 : arabinogalactan peptide 23 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021824 , Zm00025a032580
Brachypodium -
Barley HORVU6Hr1G070740.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
2 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
4 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
5 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
6 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
7 Sobic.003G037800 transferase family protein, putative, expressed -
8 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
9 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
10 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
11 Sobic.004G101300 expressed protein -
12 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
15 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
16 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G136700 expressed protein -
18 Sobic.003G319500 receptor protein kinase, putative, expressed -
19 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
20 Sobic.005G196800 membrane protein, putative, expressed -


Gene co-expression network
sample Sobic004G259432 Sobic004G259432 Sobic002G418400 Sobic002G418400 Sobic004G259432--Sobic002G418400 Sobic007G151100 Sobic007G151100 Sobic004G259432--Sobic007G151100 Sobic004G159400 Sobic004G159400 Sobic004G259432--Sobic004G159400 Sobic004G340900 Sobic004G340900 Sobic004G259432--Sobic004G340900 Sobic005G018700 Sobic005G018700 Sobic004G259432--Sobic005G018700 Sobic009G188000 Sobic009G188000 Sobic004G259432--Sobic009G188000 Sobic003G037800 Sobic003G037800 Sobic004G259432--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic004G259432--Sobic002G245100 Sobic005G168100 Sobic005G168100 Sobic004G259432--Sobic005G168100 Sobic006G083500 Sobic006G083500 Sobic002G418400--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic002G418400--Sobic003G215700 Sobic003G209000 Sobic003G209000 Sobic002G418400--Sobic003G209000 Sobic002G398901 Sobic002G398901 Sobic002G418400--Sobic002G398901 Sobic004G211833 Sobic004G211833 Sobic002G418400--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic002G418400--Sobic010G012500 Sobic001G047800 Sobic001G047800 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic001G404800 Sobic001G404800 Sobic002G418400--Sobic001G404800 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic003G158500 Sobic003G158500 Sobic007G151100--Sobic003G158500 Sobic002G356101 Sobic002G356101 Sobic007G151100--Sobic002G356101 Sobic001G538866 Sobic001G538866 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic002G140300 Sobic002G140300 Sobic007G151100--Sobic002G140300 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic002G036100 Sobic002G036100 Sobic007G151100--Sobic002G036100 Sobic001G197000 Sobic001G197000 Sobic004G159400--Sobic001G197000 Sobic001G508466 Sobic001G508466 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic004G159400--Sobic001G047800 Sobic003G273000 Sobic003G273000 Sobic004G159400--Sobic003G273000 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G159400--Sobic004G259432 Sobic004G232500 Sobic004G232500 Sobic004G159400--Sobic004G232500 Sobic009G159400 Sobic009G159400 Sobic004G340900--Sobic009G159400 Sobic002G017800 Sobic002G017800 Sobic004G340900--Sobic002G017800 Sobic009G077800 Sobic009G077800 Sobic004G340900--Sobic009G077800 Sobic010G259600 Sobic010G259600 Sobic004G340900--Sobic010G259600 Sobic001G389000 Sobic001G389000 Sobic004G340900--Sobic001G389000 Sobic004G340900--Sobic005G018700 Sobic004G321300 Sobic004G321300 Sobic004G340900--Sobic004G321300 Sobic003G084400 Sobic003G084400 Sobic004G340900--Sobic003G084400 Sobic005G196800 Sobic005G196800 Sobic004G340900--Sobic005G196800 Sobic005G018700--Sobic002G245100 Sobic005G018700--Sobic002G017800 Sobic006G103000 Sobic006G103000 Sobic005G018700--Sobic006G103000 Sobic010G185000 Sobic010G185000 Sobic005G018700--Sobic010G185000 Sobic003G429000 Sobic003G429000 Sobic005G018700--Sobic003G429000 Sobic005G018700--Sobic003G037800 Sobic005G018700--Sobic004G340900 Sobic001G050100 Sobic001G050100 Sobic005G018700--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic005G018700--Sobic003G192100 Sobic001G313600 Sobic001G313600 Sobic009G188000--Sobic001G313600 Sobic001G304100 Sobic001G304100 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic003G037800--Sobic003G429000 Sobic003G037800--Sobic002G245100 Sobic003G037800--Sobic001G389000 Sobic009G033700 Sobic009G033700 Sobic003G037800--Sobic009G033700 Sobic003G037800--Sobic009G159400 Sobic003G037800--Sobic005G018700 Sobic006G183400 Sobic006G183400 Sobic003G037800--Sobic006G183400 Sobic003G037800--Sobic004G321300 Sobic003G037800--Sobic004G340900 Sobic002G245100--Sobic005G018700 Sobic002G245100--Sobic003G037800 Sobic004G237800 Sobic004G237800 Sobic002G245100--Sobic004G237800 Sobic002G202600 Sobic002G202600 Sobic002G245100--Sobic002G202600 Sobic002G245100--Sobic005G196800 Sobic002G245100--Sobic004G340900 Sobic002G245100--Sobic004G321300 Sobic002G245100--Sobic003G158500 Sobic001G107400 Sobic001G107400 Sobic002G245100--Sobic001G107400 Sobic009G232900 Sobic009G232900 Sobic005G168100--Sobic009G232900 Sobic001G432000 Sobic001G432000 Sobic005G168100--Sobic001G432000 Sobic006G156000 Sobic006G156000 Sobic005G168100--Sobic006G156000 Sobic003G155400 Sobic003G155400 Sobic005G168100--Sobic003G155400 Sobic005G168100--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic005G168100--Sobic002G296200 Sobic005G168100--Sobic002G418400 Sobic005G168100--Sobic003G215700 Sobic003G150000 Sobic003G150000 Sobic005G168100--Sobic003G150000
Octagon: transcription factors


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