Gene annotation
Transcriptome id Sobic.010G003600.1
Synonym Sb10g000510
Functional annotation LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5Z245
Pfam PF14547
Panther DB PTHR31731 PTHR31731:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45180 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os06g01580.1 : LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a041163
Brachypodium KQK24121 , KQK24122
Barley HORVU7Hr1G096780.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
2 Sobic.010G161800 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.001G237900 expansin precursor, putative, expressed -
4 Sobic.005G066432 - -
5 Sobic.001G238300 expansin precursor, putative, expressed -
6 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
7 Sobic.010G234400 O-methyltransferase, putative, expressed -
8 Sobic.008G128066 - -
9 Sobic.002G425000 VQ domain containing protein, putative, expressed -
10 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
11 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
12 Sobic.005G014000 WRKY64, expressed -
13 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.006G172601 - -
15 Sobic.003G157600 expressed protein -
16 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.002G053700 auxin-induced protein 5NG4, putative, expressed -
19 Sobic.001G348300 expressed protein -
20 Sobic.001G348500 expressed protein -


Gene co-expression network
sample Sobic010G003600 Sobic010G003600 Sobic005G066100 Sobic005G066100 Sobic010G003600--Sobic005G066100 Sobic010G161800 Sobic010G161800 Sobic010G003600--Sobic010G161800 Sobic001G237900 Sobic001G237900 Sobic010G003600--Sobic001G237900 Sobic005G066432 Sobic005G066432 Sobic010G003600--Sobic005G066432 Sobic001G238300 Sobic001G238300 Sobic010G003600--Sobic001G238300 Sobic001G301300 Sobic001G301300 Sobic010G003600--Sobic001G301300 Sobic010G234400 Sobic010G234400 Sobic010G003600--Sobic010G234400 Sobic008G128066 Sobic008G128066 Sobic010G003600--Sobic008G128066 Sobic002G425000 Sobic002G425000 Sobic010G003600--Sobic002G425000 Sobic005G066100--Sobic005G066432 Sobic004G202400 Sobic004G202400 Sobic005G066100--Sobic004G202400 Sobic005G065900 Sobic005G065900 Sobic005G066100--Sobic005G065900 SobicK026900 SobicK026900 Sobic005G066100--SobicK026900 Sobic007G204700 Sobic007G204700 Sobic005G066100--Sobic007G204700 Sobic005G066100--Sobic002G425000 Sobic010G148800 Sobic010G148800 Sobic005G066100--Sobic010G148800 Sobic008G127933 Sobic008G127933 Sobic005G066100--Sobic008G127933 Sobic010G158500 Sobic010G158500 Sobic005G066100--Sobic010G158500 Sobic006G122800 Sobic006G122800 Sobic010G161800--Sobic006G122800 Sobic010G161800--Sobic002G425000 Sobic005G063400 Sobic005G063400 Sobic010G161800--Sobic005G063400 Sobic006G260200 Sobic006G260200 Sobic010G161800--Sobic006G260200 Sobic002G053700 Sobic002G053700 Sobic010G161800--Sobic002G053700 Sobic003G384700 Sobic003G384700 Sobic010G161800--Sobic003G384700 Sobic005G072900 Sobic005G072900 Sobic010G161800--Sobic005G072900 Sobic006G174300 Sobic006G174300 Sobic010G161800--Sobic006G174300 Sobic007G050200 Sobic007G050200 Sobic010G161800--Sobic007G050200 Sobic001G238400 Sobic001G238400 Sobic001G237900--Sobic001G238400 Sobic001G237900--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic001G237900--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G237900--Sobic006G158400 Sobic001G237900--Sobic002G425000 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic010G063000 Sobic010G063000 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600 Sobic005G066432--Sobic005G065900 Sobic005G066432--Sobic010G148800 Sobic005G066432--Sobic005G066100 Sobic006G079300 Sobic006G079300 Sobic005G066432--Sobic006G079300 Sobic006G277700 Sobic006G277700 Sobic005G066432--Sobic006G277700 Sobic003G020200 Sobic003G020200 Sobic005G066432--Sobic003G020200 Sobic004G009400 Sobic004G009400 Sobic005G066432--Sobic004G009400 Sobic005G160700 Sobic005G160700 Sobic005G066432--Sobic005G160700 Sobic004G322800 Sobic004G322800 Sobic005G066432--Sobic004G322800 Sobic006G172601 Sobic006G172601 Sobic001G238300--Sobic006G172601 Sobic002G261500 Sobic002G261500 Sobic001G238300--Sobic002G261500 Sobic004G297900 Sobic004G297900 Sobic001G238300--Sobic004G297900 Sobic001G238300--Sobic002G425000 Sobic007G090469 Sobic007G090469 Sobic001G238300--Sobic007G090469 Sobic001G238300--SobicK026900 Sobic001G238300--Sobic006G260200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic001G301300--Sobic002G053700 Sobic001G238200 Sobic001G238200 Sobic001G301300--Sobic001G238200 Sobic001G058300 Sobic001G058300 Sobic001G301300--Sobic001G058300 Sobic001G301300--Sobic005G063400 Sobic002G377700 Sobic002G377700 Sobic001G301300--Sobic002G377700 Sobic001G301300--Sobic006G172601 Sobic001G301300--Sobic001G238300 Sobic001G301300--Sobic006G122800 Sobic007G057400 Sobic007G057400 Sobic001G301300--Sobic007G057400 Sobic010G234400--Sobic002G377700 Sobic010G234400--Sobic005G066432 Sobic010G234400--Sobic002G053700 Sobic010G234400--Sobic004G009400 Sobic010G234400--Sobic010G003600 Sobic001G238000 Sobic001G238000 Sobic010G234400--Sobic001G238000 Sobic010G234400--Sobic001G301300 Sobic010G234400--Sobic006G277700 Sobic001G324100 Sobic001G324100 Sobic010G234400--Sobic001G324100 Sobic008G128066--Sobic008G127933 Sobic008G128066--Sobic007G204700 Sobic008G128200 Sobic008G128200 Sobic008G128066--Sobic008G128200 Sobic006G078900 Sobic006G078900 Sobic008G128066--Sobic006G078900 Sobic003G364200 Sobic003G364200 Sobic008G128066--Sobic003G364200 Sobic002G093700 Sobic002G093700 Sobic008G128066--Sobic002G093700 Sobic008G128066--Sobic005G066100 Sobic008G128066--Sobic002G425000 Sobic008G128066--Sobic001G237900 Sobic002G425000--Sobic001G238300 Sobic002G425000--Sobic002G261500 Sobic002G425000--Sobic008G127933 Sobic002G425000--Sobic001G237900 Sobic002G425000--Sobic006G260200 Sobic002G425000--Sobic004G297900 Sobic002G425000--SobicK026900 Sobic003G053400 Sobic003G053400 Sobic002G425000--Sobic003G053400 Sobic002G425000--Sobic006G122800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.