Gene annotation
Transcriptome id Sobic.002G093700.1
Synonym Sb02g007750
Functional annotation Jacalin-like lectin domain containing protein, putative, expressed
UniProt C5X2N2 , Q0GFG7
Pfam PF01419 PF03018
Panther DB PTHR21495 PTHR21495:SF81
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19715 : Mannose-binding lectin superfamily protein
RAP-DB (Rice) LOC_Os12g14440.1 : Jacalin-like lectin domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G487400 expressed protein -
2 Sobic.008G128066 - -
3 Sobic.006G019200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR4 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
4 Sobic.007G144501 - -
5 Sobic.006G234900 expressed protein -
6 Sobic.002G115025 - -
7 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
8 Sobic.001G256200 expressed protein -
9 Sobic.006G078900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@tetraspanin family protein, putative, expressed -
10 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
12 Sobic.005G108601 - -
13 Sobic.001G054500 expressed protein -
14 Sobic.009G209500 RING/U-box superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
15 Sobic.006G159100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.006G101300 expressed protein -
18 Sobic.002G040900 VQ domain containing protein, putative, expressed -
19 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.009G009700 expressed protein -


Gene co-expression network
sample Sobic002G093700 Sobic002G093700 Sobic001G487400 Sobic001G487400 Sobic002G093700--Sobic001G487400 Sobic008G128066 Sobic008G128066 Sobic002G093700--Sobic008G128066 Sobic006G019200 Sobic006G019200 Sobic002G093700--Sobic006G019200 Sobic007G144501 Sobic007G144501 Sobic002G093700--Sobic007G144501 Sobic006G234900 Sobic006G234900 Sobic002G093700--Sobic006G234900 Sobic002G115025 Sobic002G115025 Sobic002G093700--Sobic002G115025 Sobic004G045400 Sobic004G045400 Sobic002G093700--Sobic004G045400 Sobic001G256200 Sobic001G256200 Sobic002G093700--Sobic001G256200 Sobic006G078900 Sobic006G078900 Sobic002G093700--Sobic006G078900 Sobic008G144600 Sobic008G144600 Sobic001G487400--Sobic008G144600 Sobic001G487400--Sobic002G093700 Sobic001G487400--Sobic006G019200 Sobic001G487400--Sobic004G045400 Sobic001G487400--Sobic008G128066 Sobic009G209500 Sobic009G209500 Sobic001G487400--Sobic009G209500 Sobic001G340400 Sobic001G340400 Sobic001G487400--Sobic001G340400 Sobic001G487400--Sobic007G144501 Sobic001G487400--Sobic001G256200 Sobic008G127933 Sobic008G127933 Sobic008G128066--Sobic008G127933 Sobic007G204700 Sobic007G204700 Sobic008G128066--Sobic007G204700 Sobic008G128200 Sobic008G128200 Sobic008G128066--Sobic008G128200 Sobic008G128066--Sobic006G078900 Sobic003G364200 Sobic003G364200 Sobic008G128066--Sobic003G364200 Sobic008G128066--Sobic002G093700 Sobic005G066100 Sobic005G066100 Sobic008G128066--Sobic005G066100 Sobic002G425000 Sobic002G425000 Sobic008G128066--Sobic002G425000 Sobic001G237900 Sobic001G237900 Sobic008G128066--Sobic001G237900 Sobic005G014000 Sobic005G014000 Sobic006G019200--Sobic005G014000 Sobic006G019200--Sobic002G093700 Sobic006G019200--Sobic001G487400 Sobic006G019200--Sobic008G144600 Sobic006G019200--Sobic009G209500 Sobic006G019200--Sobic001G340400 Sobic006G019200--Sobic001G237900 Sobic002G125000 Sobic002G125000 Sobic006G019200--Sobic002G125000 Sobic002G124500 Sobic002G124500 Sobic006G019200--Sobic002G124500 Sobic007G144501--Sobic001G256200 Sobic002G042000 Sobic002G042000 Sobic007G144501--Sobic002G042000 Sobic002G040900 Sobic002G040900 Sobic007G144501--Sobic002G040900 Sobic007G144501--Sobic002G093700 Sobic001G054500 Sobic001G054500 Sobic007G144501--Sobic001G054500 Sobic007G144501--Sobic004G045400 Sobic007G144501--Sobic002G115025 Sobic007G144501--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic007G144501--Sobic006G101300 Sobic005G108601 Sobic005G108601 Sobic006G234900--Sobic005G108601 Sobic006G234900--Sobic006G101300 Sobic006G234900--Sobic002G115025 Sobic006G026500 Sobic006G026500 Sobic006G234900--Sobic006G026500 Sobic003G418500 Sobic003G418500 Sobic006G234900--Sobic003G418500 Sobic006G234900--Sobic001G256200 Sobic006G234900--Sobic002G042000 Sobic006G234900--Sobic002G093700 Sobic006G227750 Sobic006G227750 Sobic006G234900--Sobic006G227750 Sobic002G115025--Sobic005G108601 Sobic002G115025--Sobic006G234900 Sobic002G115025--Sobic001G256200 Sobic006G217900 Sobic006G217900 Sobic002G115025--Sobic006G217900 Sobic002G115025--Sobic002G042000 Sobic002G115025--Sobic001G054500 Sobic002G115025--Sobic002G093700 Sobic002G115025--Sobic007G144501 Sobic002G115025--Sobic006G101300 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic006G158400 Sobic006G158400 Sobic004G045400--Sobic006G158400 Sobic004G045400--Sobic002G042000 Sobic004G045400--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic004G045400--Sobic003G364300 Sobic007G008100 Sobic007G008100 Sobic004G045400--Sobic007G008100 Sobic001G361600 Sobic001G361600 Sobic004G045400--Sobic001G361600 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic001G256200--Sobic002G040900 Sobic001G256200--Sobic001G054500 Sobic001G256200--Sobic002G042000 Sobic001G256200--Sobic002G115025 Sobic004G148100 Sobic004G148100 Sobic001G256200--Sobic004G148100 Sobic001G256200--Sobic007G144501 Sobic006G113500 Sobic006G113500 Sobic001G256200--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic001G256200--Sobic009G009700 Sobic001G256200--Sobic006G234900 Sobic006G078900--Sobic007G204700 Sobic006G078900--Sobic008G128066 Sobic006G078900--Sobic008G128200 Sobic002G090900 Sobic002G090900 Sobic006G078900--Sobic002G090900 Sobic010G158500 Sobic010G158500 Sobic006G078900--Sobic010G158500 Sobic006G078900--Sobic002G093700 Sobic002G105300 Sobic002G105300 Sobic006G078900--Sobic002G105300 Sobic006G078900--Sobic002G124500 Sobic006G078900--Sobic003G364200
Octagon: transcription factors


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