Gene annotation
Transcriptome id Sobic.001G256200.1
Synonym Sb01g023010
Functional annotation expressed protein
UniProt A0A1B6QL02
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g26100.1 : expressed protein
MaizeGDB (Corn) Zm00025a017836
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G040900 VQ domain containing protein, putative, expressed -
2 Sobic.001G054500 expressed protein -
3 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.002G115025 - -
5 Sobic.004G148100 Cupin domain containing protein, expressed -
6 Sobic.007G144501 - -
7 Sobic.006G113500 heavy metal associated domain containing protein, expressed -
8 Sobic.009G009700 expressed protein -
9 Sobic.006G234900 expressed protein -
10 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.005G108601 - -
12 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
13 Sobic.006G101300 expressed protein -
14 Sobic.002G093700 Jacalin-like lectin domain containing protein, putative, expressed -
15 Sobic.006G217900 Leucine-rich receptor-like protein kinase("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed K13420: LRR receptor-like serine/threonine-protein kinase FLS2
16 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.001G487400 expressed protein -
18 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
19 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase


Gene co-expression network
sample Sobic001G256200 Sobic001G256200 Sobic002G040900 Sobic002G040900 Sobic001G256200--Sobic002G040900 Sobic001G054500 Sobic001G054500 Sobic001G256200--Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic001G256200--Sobic002G042000 Sobic002G115025 Sobic002G115025 Sobic001G256200--Sobic002G115025 Sobic004G148100 Sobic004G148100 Sobic001G256200--Sobic004G148100 Sobic007G144501 Sobic007G144501 Sobic001G256200--Sobic007G144501 Sobic006G113500 Sobic006G113500 Sobic001G256200--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic001G256200--Sobic009G009700 Sobic006G234900 Sobic006G234900 Sobic001G256200--Sobic006G234900 Sobic002G040900--Sobic004G148100 Sobic002G040900--Sobic001G054500 Sobic002G040900--Sobic001G256200 Sobic002G040900--Sobic002G042000 Sobic002G040900--Sobic006G113500 Sobic007G008100 Sobic007G008100 Sobic002G040900--Sobic007G008100 Sobic005G177600 Sobic005G177600 Sobic002G040900--Sobic005G177600 Sobic006G162100 Sobic006G162100 Sobic002G040900--Sobic006G162100 Sobic002G040900--Sobic007G144501 Sobic001G054500--Sobic002G042000 Sobic001G054500--Sobic007G008100 Sobic001G054500--Sobic002G040900 Sobic001G054500--Sobic001G256200 Sobic003G364300 Sobic003G364300 Sobic001G054500--Sobic003G364300 Sobic001G054500--Sobic004G148100 Sobic001G054500--Sobic006G113500 Sobic007G008000 Sobic007G008000 Sobic001G054500--Sobic007G008000 Sobic001G054500--Sobic009G009700 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic002G042000--Sobic003G364300 Sobic009G069800 Sobic009G069800 Sobic002G042000--Sobic009G069800 Sobic002G042000--Sobic001G256200 Sobic006G101300 Sobic006G101300 Sobic002G042000--Sobic006G101300 Sobic002G042000--Sobic004G148100 Sobic002G042000--Sobic007G008000 Sobic005G108601 Sobic005G108601 Sobic002G115025--Sobic005G108601 Sobic002G115025--Sobic006G234900 Sobic002G115025--Sobic001G256200 Sobic006G217900 Sobic006G217900 Sobic002G115025--Sobic006G217900 Sobic002G115025--Sobic002G042000 Sobic002G115025--Sobic001G054500 Sobic002G093700 Sobic002G093700 Sobic002G115025--Sobic002G093700 Sobic002G115025--Sobic007G144501 Sobic002G115025--Sobic006G101300 Sobic004G148100--Sobic002G040900 Sobic004G148100--Sobic006G162100 Sobic004G148100--Sobic006G113500 Sobic004G148100--Sobic005G177600 Sobic007G215600 Sobic007G215600 Sobic004G148100--Sobic007G215600 Sobic004G148100--Sobic001G054500 Sobic006G039100 Sobic006G039100 Sobic004G148100--Sobic006G039100 Sobic004G148100--Sobic002G042000 Sobic004G148100--Sobic007G008100 Sobic007G144501--Sobic001G256200 Sobic007G144501--Sobic002G042000 Sobic007G144501--Sobic002G040900 Sobic007G144501--Sobic002G093700 Sobic007G144501--Sobic001G054500 Sobic004G045400 Sobic004G045400 Sobic007G144501--Sobic004G045400 Sobic007G144501--Sobic002G115025 Sobic007G144501--Sobic006G234900 Sobic007G144501--Sobic006G101300 Sobic006G113500--Sobic004G148100 Sobic006G113500--Sobic002G040900 Sobic006G113500--Sobic001G054500 Sobic006G113500--Sobic001G256200 Sobic006G113500--Sobic007G008100 Sobic001G325400 Sobic001G325400 Sobic006G113500--Sobic001G325400 Sobic006G113500--Sobic006G039100 Sobic006G113500--Sobic006G162100 Sobic006G113500--Sobic002G042000 Sobic009G009700--Sobic001G054500 Sobic009G009700--Sobic002G040900 Sobic009G009700--Sobic001G256200 Sobic009G009700--Sobic004G148100 Sobic009G009700--Sobic002G042000 Sobic009G009600 Sobic009G009600 Sobic009G009700--Sobic009G009600 Sobic009G009700--Sobic007G008100 Sobic003G155600 Sobic003G155600 Sobic009G009700--Sobic003G155600 Sobic009G009700--Sobic002G093700 Sobic006G234900--Sobic005G108601 Sobic006G234900--Sobic006G101300 Sobic006G234900--Sobic002G115025 Sobic006G026500 Sobic006G026500 Sobic006G234900--Sobic006G026500 Sobic003G418500 Sobic003G418500 Sobic006G234900--Sobic003G418500 Sobic006G234900--Sobic001G256200 Sobic006G234900--Sobic002G042000 Sobic006G234900--Sobic002G093700 Sobic006G227750 Sobic006G227750 Sobic006G234900--Sobic006G227750
Octagon: transcription factors


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