Gene annotation
Transcriptome id Sobic.006G159100.1
Synonym MYB18, Sb06g023610, AtMYB18
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YCX0
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF629
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25560 : myb domain protein 18
RAP-DB (Rice) LOC_Os04g45020.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a048106 , Zm00025a020986 , Zm00025a032127 , Zm00025a027830 , Zm00025a018700 , Zm00025a010443 , Zm00025a028816
Brachypodium KQK15034 , KQK15035 , KQJ86560 , KQK17149 , KQJ92886 , KQK16124 , KQJ83755 , PNT75046 , KQK00510
Barley HORVU2Hr1G091590.1 , HORVU2Hr1G091590.2 , HORVU2Hr1G091590.3 , HORVU2Hr1G091590.4 , HORVU2Hr1G091590.5 , HORVU2Hr1G091530.4 , HORVU2Hr1G091530.5 , HORVU2Hr1G091530.2 , HORVU2Hr1G091530.3 , HORVU2Hr1G091530.1 , HORVU3Hr1G047290.4 , HORVU3Hr1G047290.3 , HORVU3Hr1G047290.2 , HORVU6Hr1G007010.4 , HORVU6Hr1G007010.5 , HORVU6Hr1G007010.2 , HORVU6Hr1G007010.3
Wheat TraesCS2A02G370700 , TraesCS6A02G037700 , TraesCS2B02G387700 , TraesCS3B02G224500 , TraesCS6B02G265200 , TraesCS2A02G370300 , TraesCS6D02G043600 , TraesCS2D02G367000 , TraesCS2D02G366800 , TraesCS2B02G387500 , TraesCS3A02G200300 , TraesCS2B02G387300 , TraesCS6D02G219300 , TraesCS6A02G236700 , TraesCS2B02G387800 , TraesCS2D02G366900 , TraesCS6B02G053100 , TraesCS2A02G370400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
2 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
3 Sobic.007G195800 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.010G082600 EF hand family protein, putative, expressed -
6 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
7 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.010G156500 expressed protein -
10 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
12 Sobic.002G347500 expressed protein -
13 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
14 Sobic.006G101300 expressed protein -
15 Sobic.003G418500 OsGrx_C6 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.007G144501 - -
17 Sobic.003G319500 receptor protein kinase, putative, expressed -
18 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.004G169300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed -
20 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic006G159100 Sobic006G159100 Sobic004G045400 Sobic004G045400 Sobic006G159100--Sobic004G045400 Sobic005G213600 Sobic005G213600 Sobic006G159100--Sobic005G213600 Sobic007G195800 Sobic007G195800 Sobic006G159100--Sobic007G195800 Sobic003G364300 Sobic003G364300 Sobic006G159100--Sobic003G364300 Sobic010G082600 Sobic010G082600 Sobic006G159100--Sobic010G082600 Sobic001G361600 Sobic001G361600 Sobic006G159100--Sobic001G361600 Sobic002G042000 Sobic002G042000 Sobic006G159100--Sobic002G042000 Sobic006G158400 Sobic006G158400 Sobic006G159100--Sobic006G158400 Sobic010G156500 Sobic010G156500 Sobic006G159100--Sobic010G156500 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic004G045400--Sobic006G158400 Sobic004G045400--Sobic002G042000 Sobic001G054500 Sobic001G054500 Sobic004G045400--Sobic001G054500 Sobic004G045400--Sobic003G364300 Sobic007G008100 Sobic007G008100 Sobic004G045400--Sobic007G008100 Sobic004G045400--Sobic001G361600 Sobic002G040900 Sobic002G040900 Sobic004G045400--Sobic002G040900 Sobic004G045400--Sobic006G159100 Sobic005G213600--Sobic010G156500 Sobic005G213500 Sobic005G213500 Sobic005G213600--Sobic005G213500 Sobic010G043900 Sobic010G043900 Sobic005G213600--Sobic010G043900 Sobic005G213600--Sobic003G364300 Sobic001G238400 Sobic001G238400 Sobic005G213600--Sobic001G238400 Sobic005G107900 Sobic005G107900 Sobic005G213600--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic005G213600--Sobic001G502400 Sobic005G213600--Sobic007G008100 Sobic001G313600 Sobic001G313600 Sobic005G213600--Sobic001G313600 Sobic006G137800 Sobic006G137800 Sobic007G195800--Sobic006G137800 Sobic008G139600 Sobic008G139600 Sobic007G195800--Sobic008G139600 Sobic001G502900 Sobic001G502900 Sobic007G195800--Sobic001G502900 Sobic002G389400 Sobic002G389400 Sobic007G195800--Sobic002G389400 Sobic006G191800 Sobic006G191800 Sobic007G195800--Sobic006G191800 Sobic002G323300 Sobic002G323300 Sobic007G195800--Sobic002G323300 Sobic004G065500 Sobic004G065500 Sobic007G195800--Sobic004G065500 Sobic001G115300 Sobic001G115300 Sobic007G195800--Sobic001G115300 Sobic005G113300 Sobic005G113300 Sobic007G195800--Sobic005G113300 Sobic003G364300--Sobic010G156500 Sobic009G231000 Sobic009G231000 Sobic003G364300--Sobic009G231000 Sobic002G338500 Sobic002G338500 Sobic003G364300--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic003G364300--Sobic003G364000 Sobic003G364300--Sobic007G008100 Sobic003G364300--Sobic002G042000 Sobic003G382600 Sobic003G382600 Sobic003G364300--Sobic003G382600 Sobic003G364300--Sobic001G054500 Sobic002G302500 Sobic002G302500 Sobic003G364300--Sobic002G302500 Sobic004G141100 Sobic004G141100 Sobic010G082600--Sobic004G141100 Sobic006G008000 Sobic006G008000 Sobic010G082600--Sobic006G008000 Sobic006G235100 Sobic006G235100 Sobic010G082600--Sobic006G235100 Sobic009G184000 Sobic009G184000 Sobic010G082600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic010G082600--Sobic009G145700 Sobic003G426600 Sobic003G426600 Sobic010G082600--Sobic003G426600 Sobic002G189100 Sobic002G189100 Sobic010G082600--Sobic002G189100 Sobic002G012500 Sobic002G012500 Sobic010G082600--Sobic002G012500 Sobic003G043600 Sobic003G043600 Sobic010G082600--Sobic003G043600 Sobic001G295200 Sobic001G295200 Sobic001G361600--Sobic001G295200 Sobic001G361600--Sobic005G113300 Sobic006G116700 Sobic006G116700 Sobic001G361600--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic001G361600--Sobic001G018900 Sobic004G220000 Sobic004G220000 Sobic001G361600--Sobic004G220000 Sobic003G078200 Sobic003G078200 Sobic001G361600--Sobic003G078200 Sobic006G141700 Sobic006G141700 Sobic001G361600--Sobic006G141700 Sobic009G188000 Sobic009G188000 Sobic001G361600--Sobic009G188000 Sobic003G408100 Sobic003G408100 Sobic001G361600--Sobic003G408100 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic002G042000--Sobic003G364300 Sobic009G069800 Sobic009G069800 Sobic002G042000--Sobic009G069800 Sobic001G256200 Sobic001G256200 Sobic002G042000--Sobic001G256200 Sobic006G101300 Sobic006G101300 Sobic002G042000--Sobic006G101300 Sobic004G148100 Sobic004G148100 Sobic002G042000--Sobic004G148100 Sobic007G008000 Sobic007G008000 Sobic002G042000--Sobic007G008000 Sobic008G127933 Sobic008G127933 Sobic006G158400--Sobic008G127933 Sobic008G027600 Sobic008G027600 Sobic006G158400--Sobic008G027600 Sobic001G237900 Sobic001G237900 Sobic006G158400--Sobic001G237900 Sobic010G158500 Sobic010G158500 Sobic006G158400--Sobic010G158500 Sobic007G204700 Sobic007G204700 Sobic006G158400--Sobic007G204700 Sobic003G007600 Sobic003G007600 Sobic006G158400--Sobic003G007600 Sobic006G158400--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic006G158400--Sobic001G318500 Sobic003G299300 Sobic003G299300 Sobic006G158400--Sobic003G299300 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic010G156500--Sobic003G364000 Sobic010G156500--Sobic003G382600 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic010G156500--Sobic009G231000
Octagon: transcription factors


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