Gene annotation
Transcriptome id Sobic.007G195800.1
Synonym Sb07g026430
Functional annotation uncharacterized protein family UPF0016 domain containing protein, expressed
UniProt C5YI42
Pfam PF01169
Panther DB PTHR12608:SF4 PTHR12608
NCBI CDD KOG2881; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G36290 : Uncharacterized protein family (UPF0016)
RAP-DB (Rice) LOC_Os08g41670.1 : uncharacterized protein family UPF0016 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005242 , Zm00025a029762
Brachypodium KQJ99092
Barley -
Wheat TraesCS7B02G155800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G137800 expressed protein -
2 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
3 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
4 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
5 Sobic.006G191800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
6 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
7 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
8 Sobic.001G115300 RNA recognition motif containing protein, putative, expressed -
9 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
10 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
11 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
13 Sobic.004G301300 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.006G159100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
16 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
17 Sobic.004G306300 expressed protein -
18 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
19 Sobic.001G371900 copper/zinc superoxide dismutase(PubMedID : 23915383)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
20 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G195800 Sobic007G195800 Sobic006G137800 Sobic006G137800 Sobic007G195800--Sobic006G137800 Sobic008G139600 Sobic008G139600 Sobic007G195800--Sobic008G139600 Sobic001G502900 Sobic001G502900 Sobic007G195800--Sobic001G502900 Sobic002G389400 Sobic002G389400 Sobic007G195800--Sobic002G389400 Sobic006G191800 Sobic006G191800 Sobic007G195800--Sobic006G191800 Sobic002G323300 Sobic002G323300 Sobic007G195800--Sobic002G323300 Sobic004G065500 Sobic004G065500 Sobic007G195800--Sobic004G065500 Sobic001G115300 Sobic001G115300 Sobic007G195800--Sobic001G115300 Sobic005G113300 Sobic005G113300 Sobic007G195800--Sobic005G113300 Sobic009G159400 Sobic009G159400 Sobic006G137800--Sobic009G159400 Sobic008G025600 Sobic008G025600 Sobic006G137800--Sobic008G025600 Sobic004G321300 Sobic004G321300 Sobic006G137800--Sobic004G321300 Sobic001G140900 Sobic001G140900 Sobic006G137800--Sobic001G140900 Sobic002G200600 Sobic002G200600 Sobic006G137800--Sobic002G200600 Sobic001G038900 Sobic001G038900 Sobic006G137800--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic006G137800--Sobic008G050600 Sobic006G159600 Sobic006G159600 Sobic006G137800--Sobic006G159600 Sobic003G345100 Sobic003G345100 Sobic006G137800--Sobic003G345100 Sobic006G054800 Sobic006G054800 Sobic008G139600--Sobic006G054800 Sobic008G139600--Sobic004G321300 Sobic001G112200 Sobic001G112200 Sobic008G139600--Sobic001G112200 Sobic004G237800 Sobic004G237800 Sobic008G139600--Sobic004G237800 Sobic009G145700 Sobic009G145700 Sobic008G139600--Sobic009G145700 Sobic002G055700 Sobic002G055700 Sobic008G139600--Sobic002G055700 Sobic009G184000 Sobic009G184000 Sobic008G139600--Sobic009G184000 Sobic003G043500 Sobic003G043500 Sobic008G139600--Sobic003G043500 Sobic009G145600 Sobic009G145600 Sobic008G139600--Sobic009G145600 Sobic001G475500 Sobic001G475500 Sobic001G502900--Sobic001G475500 Sobic003G160700 Sobic003G160700 Sobic001G502900--Sobic003G160700 Sobic001G502900--Sobic005G113300 Sobic003G078200 Sobic003G078200 Sobic001G502900--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic001G502900--Sobic001G018900 Sobic004G220000 Sobic004G220000 Sobic001G502900--Sobic004G220000 Sobic003G125650 Sobic003G125650 Sobic001G502900--Sobic003G125650 Sobic005G019700 Sobic005G019700 Sobic001G502900--Sobic005G019700 Sobic004G345500 Sobic004G345500 Sobic001G502900--Sobic004G345500 Sobic002G389400--Sobic001G112200 Sobic002G389400--Sobic009G184000 Sobic004G171400 Sobic004G171400 Sobic002G389400--Sobic004G171400 Sobic003G367200 Sobic003G367200 Sobic002G389400--Sobic003G367200 Sobic002G389400--Sobic004G321300 Sobic010G225251 Sobic010G225251 Sobic002G389400--Sobic010G225251 Sobic004G336500 Sobic004G336500 Sobic002G389400--Sobic004G336500 Sobic010G166500 Sobic010G166500 Sobic002G389400--Sobic010G166500 Sobic001G138600 Sobic001G138600 Sobic002G389400--Sobic001G138600 Sobic010G221300 Sobic010G221300 Sobic006G191800--Sobic010G221300 Sobic001G529400 Sobic001G529400 Sobic006G191800--Sobic001G529400 Sobic010G047100 Sobic010G047100 Sobic006G191800--Sobic010G047100 Sobic001G361600 Sobic001G361600 Sobic006G191800--Sobic001G361600 Sobic006G191800--Sobic003G125650 Sobic001G313200 Sobic001G313200 Sobic006G191800--Sobic001G313200 Sobic006G191800--Sobic002G389400 Sobic001G295200 Sobic001G295200 Sobic006G191800--Sobic001G295200 Sobic006G191800--Sobic003G160700 Sobic009G069800 Sobic009G069800 Sobic002G323300--Sobic009G069800 Sobic002G323300--Sobic004G336500 Sobic002G323300--Sobic001G115300 Sobic002G323300--Sobic002G389400 Sobic004G169300 Sobic004G169300 Sobic002G323300--Sobic004G169300 Sobic002G323300--Sobic010G166500 Sobic002G323300--Sobic003G367200 Sobic001G280800 Sobic001G280800 Sobic002G323300--Sobic001G280800 Sobic002G323300--Sobic004G321300 Sobic006G267200 Sobic006G267200 Sobic004G065500--Sobic006G267200 Sobic001G459800 Sobic001G459800 Sobic004G065500--Sobic001G459800 Sobic003G393900 Sobic003G393900 Sobic004G065500--Sobic003G393900 Sobic007G074000 Sobic007G074000 Sobic004G065500--Sobic007G074000 Sobic010G086200 Sobic010G086200 Sobic004G065500--Sobic010G086200 Sobic004G306300 Sobic004G306300 Sobic004G065500--Sobic004G306300 Sobic003G228900 Sobic003G228900 Sobic004G065500--Sobic003G228900 Sobic004G065500--Sobic004G321300 Sobic009G247900 Sobic009G247900 Sobic004G065500--Sobic009G247900 Sobic001G115300--Sobic002G323300 Sobic001G115300--Sobic006G137800 Sobic009G231000 Sobic009G231000 Sobic001G115300--Sobic009G231000 Sobic001G115300--Sobic007G195800 Sobic002G366600 Sobic002G366600 Sobic001G115300--Sobic002G366600 Sobic001G115300--Sobic002G389400 Sobic003G357100 Sobic003G357100 Sobic001G115300--Sobic003G357100 Sobic002G329800 Sobic002G329800 Sobic001G115300--Sobic002G329800 Sobic001G115300--Sobic003G367200 Sobic005G113300--Sobic004G220000 Sobic005G113300--Sobic001G295200 Sobic005G113300--Sobic001G361600 Sobic006G116700 Sobic006G116700 Sobic005G113300--Sobic006G116700 Sobic005G113300--Sobic001G018900 Sobic007G197800 Sobic007G197800 Sobic005G113300--Sobic007G197800 Sobic009G076400 Sobic009G076400 Sobic005G113300--Sobic009G076400 Sobic002G379500 Sobic002G379500 Sobic005G113300--Sobic002G379500 Sobic005G113300--Sobic003G160700
Octagon: transcription factors


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