Gene annotation
Transcriptome id Sobic.002G347500.1
Synonym Sb02g037010
Functional annotation expressed protein
UniProt C5XCA8
Pfam -
Panther DB PTHR33181 PTHR33181:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g38470.1 : expressed protein
MaizeGDB (Corn) Zm00025a014957
Brachypodium KQK15619
Barley HORVU2Hr1G038040.1
Wheat TraesCS2B02G223800 , TraesCS2A02G196100 , TraesCS2D02G204200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
2 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
3 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G316000 expressed protein -
5 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
6 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
7 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
8 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
11 Sobic.010G156500 expressed protein -
12 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
13 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
14 Sobic.003G016100 expressed protein -
15 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.003G319500 receptor protein kinase, putative, expressed -
17 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
18 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
19 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
20 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein


Gene co-expression network
sample Sobic002G347500 Sobic002G347500 Sobic003G084400 Sobic003G084400 Sobic002G347500--Sobic003G084400 Sobic005G213600 Sobic005G213600 Sobic002G347500--Sobic005G213600 Sobic006G199800 Sobic006G199800 Sobic002G347500--Sobic006G199800 Sobic003G316000 Sobic003G316000 Sobic002G347500--Sobic003G316000 Sobic004G046200 Sobic004G046200 Sobic002G347500--Sobic004G046200 Sobic001G502400 Sobic001G502400 Sobic002G347500--Sobic001G502400 Sobic010G259600 Sobic010G259600 Sobic002G347500--Sobic010G259600 Sobic003G053400 Sobic003G053400 Sobic002G347500--Sobic003G053400 Sobic001G304100 Sobic001G304100 Sobic002G347500--Sobic001G304100 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic001G500000 Sobic001G500000 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic001G367600 Sobic001G367600 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic010G156500 Sobic010G156500 Sobic005G213600--Sobic010G156500 Sobic005G213500 Sobic005G213500 Sobic005G213600--Sobic005G213500 Sobic010G043900 Sobic010G043900 Sobic005G213600--Sobic010G043900 Sobic003G364300 Sobic003G364300 Sobic005G213600--Sobic003G364300 Sobic001G238400 Sobic001G238400 Sobic005G213600--Sobic001G238400 Sobic005G213600--Sobic005G107900 Sobic005G213600--Sobic001G502400 Sobic007G008100 Sobic007G008100 Sobic005G213600--Sobic007G008100 Sobic005G213600--Sobic001G313600 Sobic006G199800--Sobic004G046200 Sobic006G199800--Sobic010G259600 Sobic003G255200 Sobic003G255200 Sobic006G199800--Sobic003G255200 Sobic009G183400 Sobic009G183400 Sobic006G199800--Sobic009G183400 Sobic006G199800--Sobic003G084400 Sobic007G169900 Sobic007G169900 Sobic006G199800--Sobic007G169900 Sobic003G255500 Sobic003G255500 Sobic006G199800--Sobic003G255500 Sobic006G044100 Sobic006G044100 Sobic006G199800--Sobic006G044100 Sobic001G231700 Sobic001G231700 Sobic006G199800--Sobic001G231700 Sobic003G016100 Sobic003G016100 Sobic003G316000--Sobic003G016100 Sobic003G079400 Sobic003G079400 Sobic003G316000--Sobic003G079400 Sobic006G150700 Sobic006G150700 Sobic003G316000--Sobic006G150700 Sobic003G316000--Sobic004G046200 Sobic007G178900 Sobic007G178900 Sobic003G316000--Sobic007G178900 Sobic002G318100 Sobic002G318100 Sobic003G316000--Sobic002G318100 Sobic007G176000 Sobic007G176000 Sobic003G316000--Sobic007G176000 Sobic009G035300 Sobic009G035300 Sobic003G316000--Sobic009G035300 Sobic004G042000 Sobic004G042000 Sobic003G316000--Sobic004G042000 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic004G046200--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic004G046200--Sobic009G187200 Sobic004G046200--Sobic006G199800 Sobic004G046200--Sobic003G084400 Sobic004G046200--Sobic003G255200 Sobic004G046200--Sobic001G500000 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic001G502400--Sobic005G107900 Sobic001G502400--Sobic001G313600 Sobic006G235100 Sobic006G235100 Sobic001G502400--Sobic006G235100 Sobic003G432700 Sobic003G432700 Sobic001G502400--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic001G502400--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic001G502400--Sobic006G075400 Sobic009G188000 Sobic009G188000 Sobic001G502400--Sobic009G188000 Sobic001G502400--Sobic005G011300 Sobic006G007900 Sobic006G007900 Sobic001G502400--Sobic006G007900 Sobic009G159400 Sobic009G159400 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic009G234100 Sobic009G234100 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic001G435000 Sobic001G435000 Sobic010G259600--Sobic001G435000 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800 Sobic002G261500 Sobic002G261500 Sobic003G053400--Sobic002G261500 Sobic009G088900 Sobic009G088900 Sobic003G053400--Sobic009G088900 Sobic002G425000 Sobic002G425000 Sobic003G053400--Sobic002G425000 Sobic002G124500 Sobic002G124500 Sobic003G053400--Sobic002G124500 Sobic009G109000 Sobic009G109000 Sobic003G053400--Sobic009G109000 Sobic010G212500 Sobic010G212500 Sobic003G053400--Sobic010G212500 Sobic004G297900 Sobic004G297900 Sobic003G053400--Sobic004G297900 Sobic002G365550 Sobic002G365550 Sobic003G053400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic003G053400--Sobic002G365801 Sobic001G304100--Sobic009G188000 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800
Octagon: transcription factors


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