Gene annotation
Transcriptome id Sobic.005G063300.1,Sobic.005G063300.2
Synonym FAR4, Sb05g005330
Functional annotation Fatty acid reductase 4 FAR4 (At) (PubMedID : 27208977)
male sterility protein, putative, expressed
UniProt A0A1Z5RGY8 , C5Y672
Pfam PF01370 PF03015 PF03015 PF07993
Panther DB PTHR11011 PTHR11011:SF25
NCBI CDD KOG1221; Acyl-CoA reductase
KEGG Orthology K13356; alcohol-forming fatty acyl-CoA reductase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT3G44540 : fatty acid reductase 4
RAP-DB (Rice) LOC_Os08g20200.1 : male sterility protein, putative, expressed
MaizeGDB (Corn) Zm00025a034039
Brachypodium KQJ95970
Barley HORVU7Hr1G092230.9 , HORVU7Hr1G092230.8 , HORVU7Hr1G020270.8 , HORVU7Hr1G020270.9 , HORVU7Hr1G092230.1 , HORVU7Hr1G020270.5 , HORVU7Hr1G020270.6 , HORVU7Hr1G020270.7 , HORVU7Hr1G092230.5 , HORVU7Hr1G092230.4 , HORVU7Hr1G020270.2 , HORVU7Hr1G020270.3 , HORVU4Hr1G087110.1 , HORVU4Hr1G087110.3 , HORVU4Hr1G087110.2 , HORVU4Hr1G087110.5 , HORVU4Hr1G087110.4 , HORVU4Hr1G087110.7 , HORVU4Hr1G087110.6 , HORVU4Hr1G087110.9 , HORVU4Hr1G087110.8 , HORVU3Hr1G002040.7 , HORVU3Hr1G002040.6 , HORVU3Hr1G002040.5 , HORVU3Hr1G002040.3 , HORVU3Hr1G002040.2 , HORVU3Hr1G002040.1 , HORVU3Hr1G002040.9 , HORVU3Hr1G002040.8 , HORVU3Hr1G002040.19 , HORVU3Hr1G002040.18 , HORVU3Hr1G002040.17 , HORVU3Hr1G002040.16 , HORVU3Hr1G002040.15 , HORVU3Hr1G002040.14 , HORVU3Hr1G002040.13 , HORVU3Hr1G002040.12 , HORVU3Hr1G002040.11 , HORVU3Hr1G002040.10 , HORVU4Hr1G087110.11 , HORVU4Hr1G087110.10 , HORVU4Hr1G087110.13 , HORVU4Hr1G087110.12 , HORVU3Hr1G002090.4 , HORVU3Hr1G002090.5 , HORVU3Hr1G002090.1 , HORVU3Hr1G002090.2 , HORVU3Hr1G002090.3 , HORVU7Hr1G092230.11 , HORVU7Hr1G092230.10 , HORVU7Hr1G092230.13 , HORVU7Hr1G092230.12 , HORVU7Hr1G020270.4 , HORVU7Hr1G092230.3 , HORVU7Hr1G092230.2 , HORVU7Hr1G020270.1 , HORVU7Hr1G092230.7 , HORVU7Hr1G092230.6 , HORVU3Hr1G002170.3
Wheat TraesCS7B02G176400 , TraesCS7B02G176400 , TraesCS7B02G176400 , TraesCS7D02G084700 , TraesCS4A02G388600 , TraesCS4A02G388600 , TraesCS4A02G388600 , TraesCS7D02G084700 , TraesCSU02G044700 , TraesCS7D02G385300 , TraesCS7B02G291100 , TraesCS7B02G291100 , TraesCS7A02G389300 , TraesCS7A02G389300 , TraesCS3B02G016000 , TraesCS6B02G012900 , TraesCS7A02G089400 , TraesCS7A02G089400 , TraesCS3B02G016500 , TraesCS3B02G016500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G005700 expressed protein -
2 Sobic.003G155600 exo70 exocyst complex subunit family protein, putative, expressed -
3 Sobic.003G255200 expressed protein -
4 Sobic.010G015300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.001G039200 expressed protein -
7 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
8 Sobic.010G092200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
9 Sobic.004G245600 expressed protein -
10 Sobic.006G150700 DEF12 - Defensin and Defensin-like DEFL family, expressed -
11 Sobic.004G217800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
12 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
13 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
14 Sobic.009G229000 expressed protein -
15 Sobic.001G139100 expressed protein -
16 Sobic.002G318100 expressed protein -
17 Sobic.006G249300 expressed protein -
18 Sobic.001G487400 expressed protein -
19 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
20 Sobic.010G236100 C2 domain containing protein, expressed -


Gene co-expression network
sample Sobic005G063300 Sobic005G063300 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic007G005700--Sobic005G063300 Sobic009G139700 Sobic009G139700 Sobic007G005700--Sobic009G139700 Sobic002G125700 Sobic002G125700 Sobic007G005700--Sobic002G125700 Sobic001G449600 Sobic001G449600 Sobic007G005700--Sobic001G449600 Sobic009G217700 Sobic009G217700 Sobic007G005700--Sobic009G217700 Sobic007G005700--Sobic003G255200 Sobic007G166000 Sobic007G166000 Sobic007G005700--Sobic007G166000 Sobic005G013600 Sobic005G013600 Sobic007G005700--Sobic005G013600 Sobic007G005700--Sobic003G155600 Sobic003G155600--Sobic007G005700 Sobic006G143400 Sobic006G143400 Sobic003G155600--Sobic006G143400 Sobic003G271500 Sobic003G271500 Sobic003G155600--Sobic003G271500 Sobic003G155600--Sobic005G063300 Sobic003G155600--Sobic001G449600 Sobic003G155600--Sobic009G217700 Sobic005G005600 Sobic005G005600 Sobic003G155600--Sobic005G005600 Sobic001G054500 Sobic001G054500 Sobic003G155600--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic003G155600--Sobic003G364300 Sobic004G107700 Sobic004G107700 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic004G046200 Sobic004G046200 Sobic003G255200--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic003G255200--Sobic010G259600 Sobic003G255200--Sobic001G449600 Sobic007G087200 Sobic007G087200 Sobic003G255200--Sobic007G087200 Sobic001G503100 Sobic001G503100 Sobic003G255200--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic003G255200--Sobic002G034800 Sobic001G481500 Sobic001G481500 Sobic010G015300--Sobic001G481500 Sobic007G151600 Sobic007G151600 Sobic010G015300--Sobic007G151600 Sobic001G325000 Sobic001G325000 Sobic010G015300--Sobic001G325000 Sobic009G229000 Sobic009G229000 Sobic010G015300--Sobic009G229000 Sobic006G249300 Sobic006G249300 Sobic010G015300--Sobic006G249300 Sobic010G015300--Sobic005G063300 Sobic010G275100 Sobic010G275100 Sobic010G015300--Sobic010G275100 Sobic001G397200 Sobic001G397200 Sobic010G015300--Sobic001G397200 Sobic001G309600 Sobic001G309600 Sobic010G015300--Sobic001G309600 Sobic001G487400 Sobic001G487400 Sobic008G144600--Sobic001G487400 Sobic006G150700 Sobic006G150700 Sobic008G144600--Sobic006G150700 Sobic002G213600 Sobic002G213600 Sobic008G144600--Sobic002G213600 Sobic003G016100 Sobic003G016100 Sobic008G144600--Sobic003G016100 Sobic003G363900 Sobic003G363900 Sobic008G144600--Sobic003G363900 Sobic008G144600--Sobic001G039200 Sobic001G340400 Sobic001G340400 Sobic008G144600--Sobic001G340400 Sobic003G079400 Sobic003G079400 Sobic008G144600--Sobic003G079400 Sobic002G093700 Sobic002G093700 Sobic008G144600--Sobic002G093700 Sobic001G039200--Sobic001G340400 Sobic001G039200--Sobic006G150700 Sobic001G039200--Sobic008G144600 Sobic001G176300 Sobic001G176300 Sobic001G039200--Sobic001G176300 Sobic005G014000 Sobic005G014000 Sobic001G039200--Sobic005G014000 Sobic003G053300 Sobic003G053300 Sobic001G039200--Sobic003G053300 Sobic001G348300 Sobic001G348300 Sobic001G039200--Sobic001G348300 Sobic001G039200--Sobic005G063300 Sobic009G035300 Sobic009G035300 Sobic001G039200--Sobic009G035300 Sobic001G082600--Sobic003G079400 Sobic001G082600--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic001G082600--Sobic006G044100 Sobic003G011600 Sobic003G011600 Sobic001G082600--Sobic003G011600 Sobic001G082600--Sobic003G255200 Sobic007G215900 Sobic007G215900 Sobic001G082600--Sobic007G215900 Sobic008G106700 Sobic008G106700 Sobic001G082600--Sobic008G106700 Sobic004G176600 Sobic004G176600 Sobic001G082600--Sobic004G176600 Sobic009G179900 Sobic009G179900 Sobic001G082600--Sobic009G179900 Sobic010G092200--Sobic010G259600 Sobic010G092200--Sobic006G249300 Sobic010G092200--Sobic001G449600 Sobic004G217800 Sobic004G217800 Sobic010G092200--Sobic004G217800 Sobic010G092200--Sobic007G166000 Sobic010G092200--Sobic003G155600 Sobic010G092200--Sobic005G063300 Sobic010G092200--Sobic007G005700 Sobic010G092200--Sobic006G143400 Sobic004G245600--Sobic005G063300 Sobic001G354200 Sobic001G354200 Sobic004G245600--Sobic001G354200 Sobic010G236100 Sobic010G236100 Sobic004G245600--Sobic010G236100 Sobic002G318100 Sobic002G318100 Sobic004G245600--Sobic002G318100 Sobic002G215300 Sobic002G215300 Sobic004G245600--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic004G245600--Sobic006G032700 Sobic004G245600--Sobic001G309600 Sobic001G129700 Sobic001G129700 Sobic004G245600--Sobic001G129700 Sobic003G138300 Sobic003G138300 Sobic004G245600--Sobic003G138300
Octagon: transcription factors


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