Gene annotation
Transcriptome id Sobic.010G015300.1
Synonym Sb10g001515
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
DUF581 domain containing protein, expressed
UniProt A0A194YHS9
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47060 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os06g03520.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G481500 - -
2 Sobic.007G151600 plant viral response family protein, putative, expressed -
3 Sobic.001G325000 expressed protein -
4 Sobic.009G229000 expressed protein -
5 Sobic.006G249300 expressed protein -
6 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
7 Sobic.010G275100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
8 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
9 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
10 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
11 Sobic.006G127900 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.003G138300 expressed protein -
13 Sobic.009G170700 bet v I allergen family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
14 Sobic.001G139100 expressed protein -
15 Sobic.001G354200 O-methyltransferase, putative, expressed -
16 Sobic.010G092200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
17 Sobic.003G255200 expressed protein -
18 Sobic.003G240600 VQ domain containing protein, putative, expressed -
19 Sobic.006G092500 expressed protein -
20 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G015300 Sobic010G015300 Sobic001G481500 Sobic001G481500 Sobic010G015300--Sobic001G481500 Sobic007G151600 Sobic007G151600 Sobic010G015300--Sobic007G151600 Sobic001G325000 Sobic001G325000 Sobic010G015300--Sobic001G325000 Sobic009G229000 Sobic009G229000 Sobic010G015300--Sobic009G229000 Sobic006G249300 Sobic006G249300 Sobic010G015300--Sobic006G249300 Sobic005G063300 Sobic005G063300 Sobic010G015300--Sobic005G063300 Sobic010G275100 Sobic010G275100 Sobic010G015300--Sobic010G275100 Sobic001G397200 Sobic001G397200 Sobic010G015300--Sobic001G397200 Sobic001G309600 Sobic001G309600 Sobic010G015300--Sobic001G309600 Sobic001G481500--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic001G481500--Sobic006G032700 Sobic001G481500--Sobic001G397200 Sobic010G032100 Sobic010G032100 Sobic001G481500--Sobic010G032100 Sobic001G149800 Sobic001G149800 Sobic001G481500--Sobic001G149800 Sobic003G138300 Sobic003G138300 Sobic001G481500--Sobic003G138300 Sobic003G086600 Sobic003G086600 Sobic001G481500--Sobic003G086600 Sobic002G215300 Sobic002G215300 Sobic001G481500--Sobic002G215300 Sobic002G068600 Sobic002G068600 Sobic001G481500--Sobic002G068600 Sobic007G151600--Sobic010G015300 Sobic007G151600--Sobic001G481500 Sobic007G151600--Sobic010G275100 Sobic007G151600--Sobic009G229000 Sobic007G151600--Sobic001G397200 Sobic007G151600--Sobic001G325000 Sobic007G151600--Sobic005G063300 Sobic003G271500 Sobic003G271500 Sobic007G151600--Sobic003G271500 Sobic010G044001 Sobic010G044001 Sobic007G151600--Sobic010G044001 Sobic003G240600 Sobic003G240600 Sobic001G325000--Sobic003G240600 Sobic009G164600 Sobic009G164600 Sobic001G325000--Sobic009G164600 Sobic001G317200 Sobic001G317200 Sobic001G325000--Sobic001G317200 Sobic005G051200 Sobic005G051200 Sobic001G325000--Sobic005G051200 Sobic007G057000 Sobic007G057000 Sobic001G325000--Sobic007G057000 Sobic004G216600 Sobic004G216600 Sobic001G325000--Sobic004G216600 Sobic009G183400 Sobic009G183400 Sobic001G325000--Sobic009G183400 Sobic002G414600 Sobic002G414600 Sobic001G325000--Sobic002G414600 Sobic008G050600 Sobic008G050600 Sobic001G325000--Sobic008G050600 Sobic004G166700 Sobic004G166700 Sobic009G229000--Sobic004G166700 Sobic006G092500 Sobic006G092500 Sobic009G229000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic009G229000--Sobic001G139100 Sobic009G035200 Sobic009G035200 Sobic009G229000--Sobic009G035200 Sobic009G229000--Sobic005G051200 Sobic003G345100 Sobic003G345100 Sobic009G229000--Sobic003G345100 Sobic001G169500 Sobic001G169500 Sobic009G229000--Sobic001G169500 Sobic010G259600 Sobic010G259600 Sobic009G229000--Sobic010G259600 Sobic005G063100 Sobic005G063100 Sobic009G229000--Sobic005G063100 Sobic006G249300--Sobic001G139100 Sobic006G249300--Sobic001G169500 Sobic004G100700 Sobic004G100700 Sobic006G249300--Sobic004G100700 Sobic008G186100 Sobic008G186100 Sobic006G249300--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic006G249300--Sobic005G011300 Sobic006G249300--Sobic003G086600 Sobic006G249300--Sobic010G259600 Sobic003G084400 Sobic003G084400 Sobic006G249300--Sobic003G084400 Sobic006G249300--Sobic009G183400 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic010G275100--Sobic006G032700 Sobic001G354200 Sobic001G354200 Sobic010G275100--Sobic001G354200 Sobic010G275100--Sobic001G481500 Sobic010G275100--Sobic003G138300 Sobic010G275100--Sobic001G397200 Sobic010G275100--Sobic010G032100 Sobic010G275100--Sobic001G309600 Sobic010G031100 Sobic010G031100 Sobic010G275100--Sobic010G031100 Sobic010G275100--Sobic002G215300 Sobic001G397200--Sobic010G032100 Sobic001G397200--Sobic001G309600 Sobic001G397200--Sobic006G032700 Sobic001G397200--Sobic001G481500 Sobic001G397200--Sobic003G086600 Sobic008G070350 Sobic008G070350 Sobic001G397200--Sobic008G070350 Sobic001G397200--Sobic002G068600 Sobic003G367200 Sobic003G367200 Sobic001G397200--Sobic003G367200 Sobic007G026600 Sobic007G026600 Sobic001G397200--Sobic007G026600 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600
Octagon: transcription factors


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