Gene annotation
Transcriptome id Sobic.004G245600.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RP44
Pfam -
Panther DB PTHR35547 PTHR35547:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g50430.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.001G354200 O-methyltransferase, putative, expressed -
3 Sobic.010G236100 C2 domain containing protein, expressed -
4 Sobic.002G318100 expressed protein -
5 Sobic.002G215300 expressed protein -
6 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
7 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
8 Sobic.001G129700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.003G138300 expressed protein -
10 Sobic.010G275100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
11 Sobic.007G005700 expressed protein -
12 Sobic.001G256000 expressed protein -
13 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
14 Sobic.010G015300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
15 Sobic.009G229000 expressed protein -
16 Sobic.001G481500 - -
17 Sobic.007G151600 plant viral response family protein, putative, expressed -
18 Sobic.010G102500 expressed protein -
19 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
20 Sobic.005G215601 - -


Gene co-expression network
sample Sobic004G245600 Sobic004G245600 Sobic005G063300 Sobic005G063300 Sobic004G245600--Sobic005G063300 Sobic001G354200 Sobic001G354200 Sobic004G245600--Sobic001G354200 Sobic010G236100 Sobic010G236100 Sobic004G245600--Sobic010G236100 Sobic002G318100 Sobic002G318100 Sobic004G245600--Sobic002G318100 Sobic002G215300 Sobic002G215300 Sobic004G245600--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic004G245600--Sobic006G032700 Sobic001G309600 Sobic001G309600 Sobic004G245600--Sobic001G309600 Sobic001G129700 Sobic001G129700 Sobic004G245600--Sobic001G129700 Sobic003G138300 Sobic003G138300 Sobic004G245600--Sobic003G138300 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic005G063300--Sobic004G245600 Sobic001G354200--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G354200--Sobic001G397200 Sobic010G275100 Sobic010G275100 Sobic001G354200--Sobic010G275100 Sobic010G032100 Sobic010G032100 Sobic001G354200--Sobic010G032100 Sobic001G354200--Sobic003G138300 Sobic001G481500 Sobic001G481500 Sobic001G354200--Sobic001G481500 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic009G229000 Sobic009G229000 Sobic001G354200--Sobic009G229000 Sobic010G236100--Sobic005G063300 Sobic010G236100--Sobic002G318100 Sobic010G236100--Sobic001G082600 Sobic010G236100--Sobic007G005700 Sobic010G236100--Sobic004G245600 Sobic004G015900 Sobic004G015900 Sobic010G236100--Sobic004G015900 Sobic003G079400 Sobic003G079400 Sobic010G236100--Sobic003G079400 Sobic001G389000 Sobic001G389000 Sobic010G236100--Sobic001G389000 Sobic005G168800 Sobic005G168800 Sobic010G236100--Sobic005G168800 Sobic002G318100--Sobic003G079400 Sobic009G187200 Sobic009G187200 Sobic002G318100--Sobic009G187200 Sobic002G318100--Sobic001G082600 Sobic003G316000 Sobic003G316000 Sobic002G318100--Sobic003G316000 Sobic008G106700 Sobic008G106700 Sobic002G318100--Sobic008G106700 Sobic004G046200 Sobic004G046200 Sobic002G318100--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic002G318100--Sobic006G044100 Sobic002G318100--Sobic005G168800 Sobic003G016100 Sobic003G016100 Sobic002G318100--Sobic003G016100 Sobic010G031100 Sobic010G031100 Sobic002G215300--Sobic010G031100 Sobic002G215300--Sobic003G138300 Sobic002G215300--Sobic001G309600 Sobic001G149800 Sobic001G149800 Sobic002G215300--Sobic001G149800 Sobic002G215300--Sobic010G032100 Sobic002G215300--Sobic006G032700 Sobic002G215300--Sobic001G481500 Sobic010G031300 Sobic010G031300 Sobic002G215300--Sobic010G031300 Sobic003G394400 Sobic003G394400 Sobic002G215300--Sobic003G394400 Sobic006G032700--Sobic003G138300 Sobic006G032700--Sobic010G032100 Sobic006G032700--Sobic001G309600 Sobic006G032700--Sobic001G397200 Sobic006G032700--Sobic001G481500 Sobic006G032700--Sobic001G354200 Sobic006G032700--Sobic010G031100 Sobic006G032700--Sobic002G215300 Sobic006G032700--Sobic001G149800 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic003G086600 Sobic003G086600 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic010G032000 Sobic010G032000 Sobic001G129700--Sobic010G032000 Sobic005G215601 Sobic005G215601 Sobic001G129700--Sobic005G215601 Sobic009G123400 Sobic009G123400 Sobic001G129700--Sobic009G123400 Sobic001G436800 Sobic001G436800 Sobic001G129700--Sobic001G436800 Sobic004G340200 Sobic004G340200 Sobic001G129700--Sobic004G340200 Sobic007G066900 Sobic007G066900 Sobic001G129700--Sobic007G066900 Sobic004G210700 Sobic004G210700 Sobic001G129700--Sobic004G210700 Sobic010G031900 Sobic010G031900 Sobic001G129700--Sobic010G031900 Sobic001G129700--Sobic001G354200 Sobic003G138300--Sobic006G032700 Sobic003G138300--Sobic001G309600 Sobic003G138300--Sobic002G215300 Sobic003G367200 Sobic003G367200 Sobic003G138300--Sobic003G367200 Sobic003G138300--Sobic010G032100 Sobic003G138300--Sobic001G397200 Sobic003G138300--Sobic001G481500 Sobic003G138300--Sobic010G031100 Sobic003G138300--Sobic001G149800
Octagon: transcription factors


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