Gene annotation
Transcriptome id Sobic.001G256000.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S7E5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g17770.1 : expressed protein
MaizeGDB (Corn) Zm00025a017833
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G150700 DEF12 - Defensin and Defensin-like DEFL family, expressed -
2 Sobic.002G318100 expressed protein -
3 Sobic.001G364400 cytochrome P450, putative, expressed -
4 Sobic.003G316000 expressed protein -
5 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.002G365500 igA FC receptor precursor, putative, expressed -
7 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
8 Sobic.003G053500 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.006G046900 expressed protein -
10 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
11 Sobic.004G245600 expressed protein -
12 Sobic.006G169900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.003G016100 expressed protein -
14 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
15 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
16 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.010G271200 expressed protein -
18 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.009G181800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 9484480)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
20 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G256000 Sobic001G256000 Sobic006G150700 Sobic006G150700 Sobic001G256000--Sobic006G150700 Sobic002G318100 Sobic002G318100 Sobic001G256000--Sobic002G318100 Sobic001G364400 Sobic001G364400 Sobic001G256000--Sobic001G364400 Sobic003G316000 Sobic003G316000 Sobic001G256000--Sobic003G316000 Sobic005G063300 Sobic005G063300 Sobic001G256000--Sobic005G063300 Sobic002G365500 Sobic002G365500 Sobic001G256000--Sobic002G365500 Sobic002G368300 Sobic002G368300 Sobic001G256000--Sobic002G368300 Sobic003G053500 Sobic003G053500 Sobic001G256000--Sobic003G053500 Sobic006G046900 Sobic006G046900 Sobic001G256000--Sobic006G046900 Sobic003G016100 Sobic003G016100 Sobic006G150700--Sobic003G016100 Sobic002G213600 Sobic002G213600 Sobic006G150700--Sobic002G213600 Sobic008G144600 Sobic008G144600 Sobic006G150700--Sobic008G144600 Sobic003G053300 Sobic003G053300 Sobic006G150700--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic006G150700--Sobic002G003800 Sobic006G150700--Sobic003G316000 Sobic010G212500 Sobic010G212500 Sobic006G150700--Sobic010G212500 Sobic006G249300 Sobic006G249300 Sobic006G150700--Sobic006G249300 Sobic009G035300 Sobic009G035300 Sobic006G150700--Sobic009G035300 Sobic003G079400 Sobic003G079400 Sobic002G318100--Sobic003G079400 Sobic009G187200 Sobic009G187200 Sobic002G318100--Sobic009G187200 Sobic001G082600 Sobic001G082600 Sobic002G318100--Sobic001G082600 Sobic002G318100--Sobic003G316000 Sobic008G106700 Sobic008G106700 Sobic002G318100--Sobic008G106700 Sobic004G046200 Sobic004G046200 Sobic002G318100--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic002G318100--Sobic006G044100 Sobic005G168800 Sobic005G168800 Sobic002G318100--Sobic005G168800 Sobic002G318100--Sobic003G016100 Sobic002G365600 Sobic002G365600 Sobic001G364400--Sobic002G365600 Sobic006G074200 Sobic006G074200 Sobic001G364400--Sobic006G074200 Sobic001G364400--Sobic002G365500 Sobic003G269500 Sobic003G269500 Sobic001G364400--Sobic003G269500 Sobic006G183900 Sobic006G183900 Sobic001G364400--Sobic006G183900 Sobic008G172500 Sobic008G172500 Sobic001G364400--Sobic008G172500 Sobic010G271200 Sobic010G271200 Sobic001G364400--Sobic010G271200 Sobic001G364400--Sobic006G150700 Sobic001G364400--Sobic002G318100 Sobic003G316000--Sobic003G016100 Sobic003G316000--Sobic003G079400 Sobic003G316000--Sobic006G150700 Sobic003G316000--Sobic004G046200 Sobic007G178900 Sobic007G178900 Sobic003G316000--Sobic007G178900 Sobic003G316000--Sobic002G318100 Sobic007G176000 Sobic007G176000 Sobic003G316000--Sobic007G176000 Sobic003G316000--Sobic009G035300 Sobic004G042000 Sobic004G042000 Sobic003G316000--Sobic004G042000 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic002G365550 Sobic002G365550 Sobic002G365500--Sobic002G365550 Sobic002G365500--Sobic002G365600 Sobic010G115700 Sobic010G115700 Sobic002G365500--Sobic010G115700 Sobic002G365801 Sobic002G365801 Sobic002G365500--Sobic002G365801 Sobic004G071000 Sobic004G071000 Sobic002G365500--Sobic004G071000 Sobic002G365500--Sobic002G368300 Sobic002G365500--Sobic006G183900 Sobic006G028400 Sobic006G028400 Sobic002G365500--Sobic006G028400 Sobic002G365500--Sobic003G269500 Sobic002G368300--Sobic002G365801 Sobic002G368300--Sobic007G178900 Sobic002G368300--Sobic004G071000 Sobic002G368300--Sobic002G365500 Sobic002G368300--Sobic002G365550 Sobic010G096400 Sobic010G096400 Sobic002G368300--Sobic010G096400 Sobic009G088900 Sobic009G088900 Sobic002G368300--Sobic009G088900 Sobic002G368300--Sobic010G212500 Sobic002G368300--Sobic007G176000 Sobic003G053500--Sobic002G368300 Sobic010G115600 Sobic010G115600 Sobic003G053500--Sobic010G115600 Sobic001G002800 Sobic001G002800 Sobic003G053500--Sobic001G002800 Sobic007G090472 Sobic007G090472 Sobic003G053500--Sobic007G090472 Sobic003G053500--Sobic006G183900 Sobic003G053500--Sobic002G365500 Sobic003G287200 Sobic003G287200 Sobic003G053500--Sobic003G287200 Sobic003G053500--Sobic006G028400 Sobic007G170300 Sobic007G170300 Sobic003G053500--Sobic007G170300 Sobic001G169500 Sobic001G169500 Sobic006G046900--Sobic001G169500 Sobic005G011300 Sobic005G011300 Sobic006G046900--Sobic005G011300 Sobic006G046900--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic006G046900--Sobic001G139100 Sobic003G377100 Sobic003G377100 Sobic006G046900--Sobic003G377100 Sobic001G459800 Sobic001G459800 Sobic006G046900--Sobic001G459800 Sobic008G186100 Sobic008G186100 Sobic006G046900--Sobic008G186100 Sobic004G336500 Sobic004G336500 Sobic006G046900--Sobic004G336500 Sobic002G068600 Sobic002G068600 Sobic006G046900--Sobic002G068600
Octagon: transcription factors


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