Gene annotation
Transcriptome id Sobic.002G365500.1
Synonym Sb02g038440
Functional annotation igA FC receptor precursor, putative, expressed
UniProt A0A1B6QFF0
Pfam -
Panther DB PTHR33088
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09530 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os07g40860.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a048670 , Zm00025a015105
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G365550 - -
2 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
3 Sobic.010G115700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G365801 - -
5 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
7 Sobic.006G183900 cytochrome P450, putative, expressed -
8 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
9 Sobic.003G269500 "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@SbMAX1a (cytochrome P450 711A enzyme in sorghum) synthesized 18-hydroxy-carlactonoic acid (18-hydroxy-CLA) directly from carlactone (CL)(PubMedID : 34970291)@cytochrome P450, putative, expressed -
10 Sobic.007G109600 expressed protein -
11 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
12 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
13 Sobic.008G055100 dirigent, putative, expressed -
14 Sobic.001G364400 cytochrome P450, putative, expressed -
15 Sobic.006G282300 - -
16 Sobic.003G287200 WRKY23, expressed -
17 Sobic.010G212500 - -
18 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.006G074200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@"uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in stay green (QSTG18_3)"(PubMedID : 24655390)@LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic002G365500 Sobic002G365500 Sobic002G365550 Sobic002G365550 Sobic002G365500--Sobic002G365550 Sobic002G365600 Sobic002G365600 Sobic002G365500--Sobic002G365600 Sobic010G115700 Sobic010G115700 Sobic002G365500--Sobic010G115700 Sobic002G365801 Sobic002G365801 Sobic002G365500--Sobic002G365801 Sobic004G071000 Sobic004G071000 Sobic002G365500--Sobic004G071000 Sobic002G368300 Sobic002G368300 Sobic002G365500--Sobic002G368300 Sobic006G183900 Sobic006G183900 Sobic002G365500--Sobic006G183900 Sobic006G028400 Sobic006G028400 Sobic002G365500--Sobic006G028400 Sobic003G269500 Sobic003G269500 Sobic002G365500--Sobic003G269500 Sobic002G365550--Sobic002G365801 Sobic002G365550--Sobic002G365600 Sobic002G365550--Sobic002G365500 Sobic002G365550--Sobic004G071000 Sobic002G365550--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic002G365550--Sobic010G212500 Sobic010G096400 Sobic010G096400 Sobic002G365550--Sobic010G096400 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic002G365600--Sobic002G365550 Sobic002G365600--Sobic003G269500 Sobic002G365600--Sobic002G365500 Sobic008G172500 Sobic008G172500 Sobic002G365600--Sobic008G172500 Sobic002G365600--Sobic006G183900 Sobic002G365600--Sobic004G071000 Sobic002G365600--Sobic002G365801 Sobic001G364400 Sobic001G364400 Sobic002G365600--Sobic001G364400 Sobic002G365600--Sobic010G212500 Sobic010G115700--Sobic002G365801 Sobic010G115700--Sobic002G365550 Sobic010G115700--Sobic002G365500 Sobic010G115700--Sobic004G071000 Sobic010G115700--Sobic010G096400 Sobic010G115700--Sobic002G365600 Sobic010G115700--Sobic002G368300 Sobic007G178900 Sobic007G178900 Sobic010G115700--Sobic007G178900 Sobic009G088900 Sobic009G088900 Sobic010G115700--Sobic009G088900 Sobic002G365801--Sobic002G365550 Sobic002G365801--Sobic004G071000 Sobic002G365801--Sobic010G115700 Sobic002G365801--Sobic010G212500 Sobic002G365801--Sobic002G368300 Sobic002G365801--Sobic002G365500 Sobic002G365801--Sobic010G096400 Sobic001G379400 Sobic001G379400 Sobic002G365801--Sobic001G379400 Sobic002G365801--Sobic009G088900 Sobic004G071000--Sobic002G365801 Sobic004G071000--Sobic002G365550 Sobic004G071000--Sobic002G368300 Sobic004G071000--Sobic002G365500 Sobic008G055100 Sobic008G055100 Sobic004G071000--Sobic008G055100 Sobic004G071000--Sobic010G115700 Sobic004G071000--Sobic010G212500 Sobic004G071000--Sobic002G365600 Sobic004G071000--Sobic003G053400 Sobic002G368300--Sobic002G365801 Sobic002G368300--Sobic007G178900 Sobic002G368300--Sobic004G071000 Sobic002G368300--Sobic002G365500 Sobic002G368300--Sobic002G365550 Sobic002G368300--Sobic010G096400 Sobic002G368300--Sobic009G088900 Sobic002G368300--Sobic010G212500 Sobic007G176000 Sobic007G176000 Sobic002G368300--Sobic007G176000 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic007G109600 Sobic007G109600 Sobic006G183900--Sobic007G109600 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic007G170300 Sobic007G170300 Sobic006G183900--Sobic007G170300 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500 Sobic006G028400--Sobic006G183900 Sobic003G203600 Sobic003G203600 Sobic006G028400--Sobic003G203600 Sobic006G028400--Sobic007G170300 Sobic006G028400--Sobic007G109600 Sobic006G028400--Sobic007G178900 Sobic002G185800 Sobic002G185800 Sobic006G028400--Sobic002G185800 Sobic006G028400--Sobic002G365500 Sobic006G028400--Sobic004G071000 Sobic006G028400--Sobic002G365550 Sobic003G269500--Sobic002G365600 Sobic010G106500 Sobic010G106500 Sobic003G269500--Sobic010G106500 Sobic003G269500--Sobic002G365550 Sobic003G269500--Sobic002G365500 Sobic003G269500--Sobic006G183900 Sobic003G269500--Sobic008G172500 Sobic003G269500--Sobic010G096400 Sobic003G269500--Sobic010G212500 Sobic009G109000 Sobic009G109000 Sobic003G269500--Sobic009G109000
Octagon: transcription factors


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