Gene annotation
Transcriptome id Sobic.006G074200.1
Synonym Sb06g016160,
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
"uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in stay green (QSTG18_3)" (PubMedID : 24655390)
LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5YG97
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05960 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os04g33920.1 : LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a011482 , Zm00025a011480
Brachypodium KQJ82549 , PNT73198
Barley HORVU2Hr1G104430.2 , HORVU2Hr1G104430.3 , HORVU2Hr1G104430.1 , HORVU3Hr1G085680.30 , HORVU3Hr1G085680.31 , HORVU3Hr1G085680.18 , HORVU3Hr1G085680.19 , HORVU3Hr1G085680.17 , HORVU2Hr1G073680.1 , HORVU2Hr1G073680.2 , HORVU2Hr1G073680.3 , HORVU3Hr1G085680.4 , HORVU3Hr1G085680.5 , HORVU3Hr1G085680.20 , HORVU3Hr1G085680.27 , HORVU3Hr1G085680.29 , HORVU3Hr1G085680.28
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G364400 cytochrome P450, putative, expressed -
2 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
3 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.006G183900 cytochrome P450, putative, expressed -
5 Sobic.003G287200 WRKY23, expressed -
6 Sobic.008G172500 ATCHX, putative, expressed -
7 Sobic.002G365500 igA FC receptor precursor, putative, expressed -
8 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
9 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.004G283900 cytochrome P450, putative, expressed -
11 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
12 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
13 Sobic.007G015200 cytochrome P450, putative, expressed -
14 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
15 Sobic.001G455100 expressed protein -
16 Sobic.003G015300 expressed protein -
17 Sobic.004G249000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
19 Sobic.010G271200 expressed protein -
20 Sobic.010G115700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic006G074200 Sobic006G074200 Sobic001G364400 Sobic001G364400 Sobic006G074200--Sobic001G364400 Sobic007G170300 Sobic007G170300 Sobic006G074200--Sobic007G170300 Sobic005G066000 Sobic005G066000 Sobic006G074200--Sobic005G066000 Sobic006G183900 Sobic006G183900 Sobic006G074200--Sobic006G183900 Sobic003G287200 Sobic003G287200 Sobic006G074200--Sobic003G287200 Sobic008G172500 Sobic008G172500 Sobic006G074200--Sobic008G172500 Sobic002G365500 Sobic002G365500 Sobic006G074200--Sobic002G365500 Sobic002G365600 Sobic002G365600 Sobic006G074200--Sobic002G365600 Sobic010G110800 Sobic010G110800 Sobic006G074200--Sobic010G110800 Sobic001G364400--Sobic002G365600 Sobic001G364400--Sobic006G074200 Sobic001G364400--Sobic002G365500 Sobic003G269500 Sobic003G269500 Sobic001G364400--Sobic003G269500 Sobic001G364400--Sobic006G183900 Sobic001G364400--Sobic008G172500 Sobic010G271200 Sobic010G271200 Sobic001G364400--Sobic010G271200 Sobic006G150700 Sobic006G150700 Sobic001G364400--Sobic006G150700 Sobic002G318100 Sobic002G318100 Sobic001G364400--Sobic002G318100 Sobic007G015200 Sobic007G015200 Sobic007G170300--Sobic007G015200 Sobic002G101400 Sobic002G101400 Sobic007G170300--Sobic002G101400 Sobic005G046700 Sobic005G046700 Sobic007G170300--Sobic005G046700 Sobic003G203600 Sobic003G203600 Sobic007G170300--Sobic003G203600 Sobic006G028400 Sobic006G028400 Sobic007G170300--Sobic006G028400 Sobic007G170300--Sobic006G183900 Sobic007G073000 Sobic007G073000 Sobic007G170300--Sobic007G073000 Sobic002G185800 Sobic002G185800 Sobic007G170300--Sobic002G185800 Sobic007G170300--Sobic003G287200 Sobic005G066000--Sobic008G172500 Sobic005G149600 Sobic005G149600 Sobic005G066000--Sobic005G149600 Sobic005G066000--Sobic006G074200 Sobic002G163200 Sobic002G163200 Sobic005G066000--Sobic002G163200 Sobic006G117500 Sobic006G117500 Sobic005G066000--Sobic006G117500 Sobic005G066000--Sobic003G287200 Sobic003G015200 Sobic003G015200 Sobic005G066000--Sobic003G015200 Sobic001G212451 Sobic001G212451 Sobic005G066000--Sobic001G212451 Sobic005G066000--Sobic006G183900 Sobic006G183900--Sobic003G287200 Sobic007G109600 Sobic007G109600 Sobic006G183900--Sobic007G109600 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic006G183900--Sobic007G170300 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500 Sobic003G287200--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic003G287200--Sobic006G229100 Sobic001G002800 Sobic001G002800 Sobic003G287200--Sobic001G002800 Sobic001G360500 Sobic001G360500 Sobic003G287200--Sobic001G360500 Sobic001G503000 Sobic001G503000 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic010G096700 Sobic010G096700 Sobic003G287200--Sobic010G096700 Sobic003G287200--Sobic007G170300 Sobic003G287200--Sobic006G117500 Sobic008G172500--Sobic002G365600 Sobic008G172500--Sobic003G269500 Sobic008G172500--Sobic005G066000 Sobic002G365550 Sobic002G365550 Sobic008G172500--Sobic002G365550 Sobic008G172500--Sobic006G074200 Sobic009G073800 Sobic009G073800 Sobic008G172500--Sobic009G073800 Sobic009G109000 Sobic009G109000 Sobic008G172500--Sobic009G109000 Sobic008G172500--Sobic001G364400 Sobic008G172500--Sobic002G365500 Sobic002G365500--Sobic002G365550 Sobic002G365500--Sobic002G365600 Sobic010G115700 Sobic010G115700 Sobic002G365500--Sobic010G115700 Sobic002G365801 Sobic002G365801 Sobic002G365500--Sobic002G365801 Sobic004G071000 Sobic004G071000 Sobic002G365500--Sobic004G071000 Sobic002G368300 Sobic002G368300 Sobic002G365500--Sobic002G368300 Sobic002G365500--Sobic006G183900 Sobic002G365500--Sobic006G028400 Sobic002G365500--Sobic003G269500 Sobic002G365600--Sobic002G365550 Sobic002G365600--Sobic003G269500 Sobic002G365600--Sobic002G365500 Sobic002G365600--Sobic008G172500 Sobic002G365600--Sobic006G183900 Sobic002G365600--Sobic004G071000 Sobic002G365600--Sobic002G365801 Sobic002G365600--Sobic001G364400 Sobic010G212500 Sobic010G212500 Sobic002G365600--Sobic010G212500 Sobic003G015300 Sobic003G015300 Sobic010G110800--Sobic003G015300 Sobic002G001700 Sobic002G001700 Sobic010G110800--Sobic002G001700 Sobic010G272300 Sobic010G272300 Sobic010G110800--Sobic010G272300 Sobic005G065900 Sobic005G065900 Sobic010G110800--Sobic005G065900 Sobic003G280400 Sobic003G280400 Sobic010G110800--Sobic003G280400 Sobic006G256900 Sobic006G256900 Sobic010G110800--Sobic006G256900 Sobic006G197100 Sobic006G197100 Sobic010G110800--Sobic006G197100 Sobic006G125100 Sobic006G125100 Sobic010G110800--Sobic006G125100 Sobic010G110800--Sobic002G185800
Octagon: transcription factors


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