Gene annotation
Transcriptome id Sobic.008G172500.1
Synonym CHX19, ATCHX19, Sb08g021720
Functional annotation ATCHX, putative, expressed
UniProt A0A1Z5R786
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G17630 : cation/H+ exchanger 19
RAP-DB (Rice) LOC_Os12g42200.1 : ATCHX, putative, expressed
MaizeGDB (Corn) Zm00025a004711 , Zm00025a004710 , Zm00025a040913 , Zm00025a024494
Brachypodium KQJ85768 , KQJ85769 , KQK12360 , KQK07657
Barley HORVU5Hr1G008270.1 , HORVU5Hr1G008270.2 , HORVU5Hr1G008270.3 , HORVU5Hr1G008270.4 , HORVU5Hr1G008270.5 , HORVU5Hr1G008270.6 , HORVU5Hr1G008270.7
Wheat TraesCS5A02G031600 , TraesCS5D02G039800 , TraesCS5A02G031700 , TraesCS1D02G039000 , TraesCS1D02G039000 , TraesCS5D02G039900 , TraesCS1B02G047900 , TraesCS5B02G031800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
2 Sobic.003G269500 "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@SbMAX1a (cytochrome P450 711A enzyme in sorghum) synthesized 18-hydroxy-carlactonoic acid (18-hydroxy-CLA) directly from carlactone (CL)(PubMedID : 34970291)@cytochrome P450, putative, expressed -
3 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.002G365550 - -
5 Sobic.006G074200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@"uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in stay green (QSTG18_3)"(PubMedID : 24655390)@LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.009G073800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.009G109000 expressed protein -
8 Sobic.001G364400 cytochrome P450, putative, expressed -
9 Sobic.002G365500 igA FC receptor precursor, putative, expressed -
10 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
11 Sobic.006G183900 cytochrome P450, putative, expressed -
12 Sobic.005G041300 amino acid permease family protein, putative, expressed -
13 Sobic.005G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@cytokinin-O-glucosyltransferase 3, putative, expressed -
14 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.001G455100 expressed protein -
16 Sobic.010G115700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
18 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
19 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.003G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic008G172500 Sobic008G172500 Sobic002G365600 Sobic002G365600 Sobic008G172500--Sobic002G365600 Sobic003G269500 Sobic003G269500 Sobic008G172500--Sobic003G269500 Sobic005G066000 Sobic005G066000 Sobic008G172500--Sobic005G066000 Sobic002G365550 Sobic002G365550 Sobic008G172500--Sobic002G365550 Sobic006G074200 Sobic006G074200 Sobic008G172500--Sobic006G074200 Sobic009G073800 Sobic009G073800 Sobic008G172500--Sobic009G073800 Sobic009G109000 Sobic009G109000 Sobic008G172500--Sobic009G109000 Sobic001G364400 Sobic001G364400 Sobic008G172500--Sobic001G364400 Sobic002G365500 Sobic002G365500 Sobic008G172500--Sobic002G365500 Sobic002G365600--Sobic002G365550 Sobic002G365600--Sobic003G269500 Sobic002G365600--Sobic002G365500 Sobic002G365600--Sobic008G172500 Sobic006G183900 Sobic006G183900 Sobic002G365600--Sobic006G183900 Sobic004G071000 Sobic004G071000 Sobic002G365600--Sobic004G071000 Sobic002G365801 Sobic002G365801 Sobic002G365600--Sobic002G365801 Sobic002G365600--Sobic001G364400 Sobic010G212500 Sobic010G212500 Sobic002G365600--Sobic010G212500 Sobic003G269500--Sobic002G365600 Sobic010G106500 Sobic010G106500 Sobic003G269500--Sobic010G106500 Sobic003G269500--Sobic002G365550 Sobic003G269500--Sobic002G365500 Sobic003G269500--Sobic006G183900 Sobic003G269500--Sobic008G172500 Sobic010G096400 Sobic010G096400 Sobic003G269500--Sobic010G096400 Sobic003G269500--Sobic010G212500 Sobic003G269500--Sobic009G109000 Sobic005G066000--Sobic008G172500 Sobic005G149600 Sobic005G149600 Sobic005G066000--Sobic005G149600 Sobic005G066000--Sobic006G074200 Sobic002G163200 Sobic002G163200 Sobic005G066000--Sobic002G163200 Sobic006G117500 Sobic006G117500 Sobic005G066000--Sobic006G117500 Sobic003G287200 Sobic003G287200 Sobic005G066000--Sobic003G287200 Sobic003G015200 Sobic003G015200 Sobic005G066000--Sobic003G015200 Sobic001G212451 Sobic001G212451 Sobic005G066000--Sobic001G212451 Sobic005G066000--Sobic006G183900 Sobic002G365550--Sobic002G365801 Sobic002G365550--Sobic002G365600 Sobic002G365550--Sobic002G365500 Sobic002G365550--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365550--Sobic010G115700 Sobic002G365550--Sobic010G212500 Sobic002G365550--Sobic010G096400 Sobic002G368300 Sobic002G368300 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic006G074200--Sobic001G364400 Sobic007G170300 Sobic007G170300 Sobic006G074200--Sobic007G170300 Sobic006G074200--Sobic005G066000 Sobic006G074200--Sobic006G183900 Sobic006G074200--Sobic003G287200 Sobic006G074200--Sobic008G172500 Sobic006G074200--Sobic002G365500 Sobic006G074200--Sobic002G365600 Sobic010G110800 Sobic010G110800 Sobic006G074200--Sobic010G110800 Sobic008G034700 Sobic008G034700 Sobic009G073800--Sobic008G034700 Sobic009G073800--Sobic008G172500 Sobic009G073800--Sobic003G269500 Sobic009G073800--Sobic002G365600 Sobic009G073800--Sobic005G066000 Sobic002G389100 Sobic002G389100 Sobic009G073800--Sobic002G389100 Sobic009G073800--Sobic006G183900 Sobic009G073800--Sobic006G074200 Sobic010G067400 Sobic010G067400 Sobic009G073800--Sobic010G067400 Sobic003G311800 Sobic003G311800 Sobic009G109000--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic008G009400 Sobic008G009400 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100 Sobic001G364400--Sobic002G365600 Sobic001G364400--Sobic006G074200 Sobic001G364400--Sobic002G365500 Sobic001G364400--Sobic003G269500 Sobic001G364400--Sobic006G183900 Sobic001G364400--Sobic008G172500 Sobic010G271200 Sobic010G271200 Sobic001G364400--Sobic010G271200 Sobic006G150700 Sobic006G150700 Sobic001G364400--Sobic006G150700 Sobic002G318100 Sobic002G318100 Sobic001G364400--Sobic002G318100 Sobic002G365500--Sobic002G365550 Sobic002G365500--Sobic002G365600 Sobic002G365500--Sobic010G115700 Sobic002G365500--Sobic002G365801 Sobic002G365500--Sobic004G071000 Sobic002G365500--Sobic002G368300 Sobic002G365500--Sobic006G183900 Sobic006G028400 Sobic006G028400 Sobic002G365500--Sobic006G028400 Sobic002G365500--Sobic003G269500
Octagon: transcription factors


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