Gene annotation
Transcriptome id Sobic.008G034700.1
Synonym PSK3, Sb08g002990, ATPSK3, PSK1
Functional annotation phytosulfokines precursor, putative, expressed
UniProt C5YRP8
Pfam PF06404
Panther DB PTHR33285 PTHR33285:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008283; cell population proliferation GO:0008083growth factor activity GO:0005576extracellular region


Orthologs (automatic annotation)
TAIR AT3G44735 : PHYTOSULFOKINE 3 PRECURSOR
RAP-DB (Rice) LOC_Os12g05260.1 : phytosulfokines precursor, putative, expressed
MaizeGDB (Corn) Zm00025a033468 , Zm00025a053858 , Zm00025a053857
Brachypodium KQJ92294 , KQJ92293
Barley HORVU5Hr1G041400.1
Wheat TraesCS5D02G137900 , TraesCS5B02G130300 , TraesCS5A02G130400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G183900 cytochrome P450, putative, expressed -
2 Sobic.007G109600 expressed protein -
3 Sobic.002G365600 igA FC receptor precursor, putative, expressed -
4 Sobic.008G048400 citrate-binding protein precursor, putative, expressed -
5 Sobic.003G269500 "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@SbMAX1a (cytochrome P450 711A enzyme in sorghum) synthesized 18-hydroxy-carlactonoic acid (18-hydroxy-CLA) directly from carlactone (CL)(PubMedID : 34970291)@cytochrome P450, putative, expressed -
6 Sobic.005G041300 amino acid permease family protein, putative, expressed -
7 Sobic.009G073800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.002G365500 igA FC receptor precursor, putative, expressed -
10 Sobic.002G185800 transporter, putative, expressed -
11 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.008G172500 ATCHX, putative, expressed -
13 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
14 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
15 Sobic.003G287200 WRKY23, expressed -
16 Sobic.008G055100 dirigent, putative, expressed -
17 Sobic.001G455100 expressed protein -
18 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
19 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
20 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic008G034700 Sobic008G034700 Sobic006G183900 Sobic006G183900 Sobic008G034700--Sobic006G183900 Sobic007G109600 Sobic007G109600 Sobic008G034700--Sobic007G109600 Sobic002G365600 Sobic002G365600 Sobic008G034700--Sobic002G365600 Sobic008G048400 Sobic008G048400 Sobic008G034700--Sobic008G048400 Sobic003G269500 Sobic003G269500 Sobic008G034700--Sobic003G269500 Sobic005G041300 Sobic005G041300 Sobic008G034700--Sobic005G041300 Sobic009G073800 Sobic009G073800 Sobic008G034700--Sobic009G073800 Sobic004G126700 Sobic004G126700 Sobic008G034700--Sobic004G126700 Sobic002G365500 Sobic002G365500 Sobic008G034700--Sobic002G365500 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic006G183900--Sobic007G109600 Sobic006G028400 Sobic006G028400 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic007G170300 Sobic007G170300 Sobic006G183900--Sobic007G170300 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500 Sobic007G109600--Sobic006G183900 Sobic007G109600--Sobic004G248500 Sobic007G109600--Sobic006G028400 Sobic005G097600 Sobic005G097600 Sobic007G109600--Sobic005G097600 Sobic001G212451 Sobic001G212451 Sobic007G109600--Sobic001G212451 Sobic007G109600--Sobic002G365500 Sobic007G109600--Sobic002G365600 Sobic007G109600--Sobic008G034700 Sobic003G269600 Sobic003G269600 Sobic007G109600--Sobic003G269600 Sobic002G365550 Sobic002G365550 Sobic002G365600--Sobic002G365550 Sobic002G365600--Sobic003G269500 Sobic002G365600--Sobic002G365500 Sobic008G172500 Sobic008G172500 Sobic002G365600--Sobic008G172500 Sobic002G365600--Sobic006G183900 Sobic004G071000 Sobic004G071000 Sobic002G365600--Sobic004G071000 Sobic002G365801 Sobic002G365801 Sobic002G365600--Sobic002G365801 Sobic001G364400 Sobic001G364400 Sobic002G365600--Sobic001G364400 Sobic010G212500 Sobic010G212500 Sobic002G365600--Sobic010G212500 Sobic007G176100 Sobic007G176100 Sobic008G048400--Sobic007G176100 Sobic002G216100 Sobic002G216100 Sobic008G048400--Sobic002G216100 Sobic010G096400 Sobic010G096400 Sobic008G048400--Sobic010G096400 Sobic002G185800 Sobic002G185800 Sobic008G048400--Sobic002G185800 Sobic004G139300 Sobic004G139300 Sobic008G048400--Sobic004G139300 Sobic008G048400--Sobic008G034700 Sobic007G176000 Sobic007G176000 Sobic008G048400--Sobic007G176000 Sobic008G048400--Sobic003G269600 Sobic008G048400--Sobic006G183900 Sobic003G269500--Sobic002G365600 Sobic010G106500 Sobic010G106500 Sobic003G269500--Sobic010G106500 Sobic003G269500--Sobic002G365550 Sobic003G269500--Sobic002G365500 Sobic003G269500--Sobic006G183900 Sobic003G269500--Sobic008G172500 Sobic003G269500--Sobic010G096400 Sobic003G269500--Sobic010G212500 Sobic009G109000 Sobic009G109000 Sobic003G269500--Sobic009G109000 Sobic001G430100 Sobic001G430100 Sobic005G041300--Sobic001G430100 Sobic004G258900 Sobic004G258900 Sobic005G041300--Sobic004G258900 Sobic005G041300--Sobic008G034700 Sobic005G041300--Sobic006G183900 Sobic001G455100 Sobic001G455100 Sobic005G041300--Sobic001G455100 Sobic005G041300--Sobic010G096400 Sobic008G035800 Sobic008G035800 Sobic005G041300--Sobic008G035800 Sobic004G348800 Sobic004G348800 Sobic005G041300--Sobic004G348800 Sobic005G041300--Sobic002G365600 Sobic009G073800--Sobic008G034700 Sobic009G073800--Sobic008G172500 Sobic009G073800--Sobic003G269500 Sobic009G073800--Sobic002G365600 Sobic005G066000 Sobic005G066000 Sobic009G073800--Sobic005G066000 Sobic002G389100 Sobic002G389100 Sobic009G073800--Sobic002G389100 Sobic009G073800--Sobic006G183900 Sobic006G074200 Sobic006G074200 Sobic009G073800--Sobic006G074200 Sobic010G067400 Sobic010G067400 Sobic009G073800--Sobic010G067400 Sobic004G126700--Sobic003G287200 Sobic001G026300 Sobic001G026300 Sobic004G126700--Sobic001G026300 Sobic005G089200 Sobic005G089200 Sobic004G126700--Sobic005G089200 Sobic010G170300 Sobic010G170300 Sobic004G126700--Sobic010G170300 Sobic004G126700--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic004G126700--Sobic006G229100 Sobic004G126700--Sobic008G034700 Sobic005G149600 Sobic005G149600 Sobic004G126700--Sobic005G149600 Sobic001G108000 Sobic001G108000 Sobic004G126700--Sobic001G108000 Sobic002G365500--Sobic002G365550 Sobic002G365500--Sobic002G365600 Sobic010G115700 Sobic010G115700 Sobic002G365500--Sobic010G115700 Sobic002G365500--Sobic002G365801 Sobic002G365500--Sobic004G071000 Sobic002G368300 Sobic002G368300 Sobic002G365500--Sobic002G368300 Sobic002G365500--Sobic006G183900 Sobic002G365500--Sobic006G028400 Sobic002G365500--Sobic003G269500
Octagon: transcription factors


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