Gene annotation
Transcriptome id Sobic.008G048400.1
Synonym Sb08g004110
Functional annotation citrate-binding protein precursor, putative, expressed
UniProt C5YSB1
Pfam PF08787
Panther DB PTHR33681 PTHR33681:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g06900.1 : citrate-binding protein precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92054 , PNT65375 , KQJ92113
Barley HORVU3Hr1G020030.1 , HORVU0Hr1G020380.1 , HORVU3Hr1G020010.1 , HORVU3Hr1G020010.2 , HORVU3Hr1G020010.3 , HORVU3Hr1G020080.1
Wheat TraesCS3D02G112500 , TraesCS4A02G425400 , TraesCS7A02G063000 , TraesCS3A02G110600 , TraesCS7A02G063100 , TraesCS7D02G057900 , TraesCS7D02G205700 , TraesCS3A02G110700 , TraesCS3A02G110500 , TraesCS7D02G205600 , TraesCS4A02G425500 , TraesCS3B02G129600 , TraesCS2B02G088200 , TraesCS7A02G062900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.002G216100 cytochrome P450, putative, expressed -
3 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
4 Sobic.002G185800 transporter, putative, expressed -
5 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
6 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
7 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
9 Sobic.006G183900 cytochrome P450, putative, expressed -
10 Sobic.007G030501 - -
11 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.003G039600 expressed protein -
13 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
14 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
15 Sobic.001G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.008G055100 dirigent, putative, expressed -
17 Sobic.006G274933 - -
18 Sobic.003G405300 regulatory protein, putative, expressed -
19 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
20 Sobic.007G090472 - -


Gene co-expression network
sample Sobic008G048400 Sobic008G048400 Sobic007G176100 Sobic007G176100 Sobic008G048400--Sobic007G176100 Sobic002G216100 Sobic002G216100 Sobic008G048400--Sobic002G216100 Sobic010G096400 Sobic010G096400 Sobic008G048400--Sobic010G096400 Sobic002G185800 Sobic002G185800 Sobic008G048400--Sobic002G185800 Sobic004G139300 Sobic004G139300 Sobic008G048400--Sobic004G139300 Sobic008G034700 Sobic008G034700 Sobic008G048400--Sobic008G034700 Sobic007G176000 Sobic007G176000 Sobic008G048400--Sobic007G176000 Sobic003G269600 Sobic003G269600 Sobic008G048400--Sobic003G269600 Sobic006G183900 Sobic006G183900 Sobic008G048400--Sobic006G183900 Sobic007G176100--Sobic007G176000 Sobic007G030501 Sobic007G030501 Sobic007G176100--Sobic007G030501 Sobic007G176100--Sobic002G185800 Sobic005G046700 Sobic005G046700 Sobic007G176100--Sobic005G046700 Sobic007G176100--Sobic008G048400 Sobic007G178900 Sobic007G178900 Sobic007G176100--Sobic007G178900 Sobic007G176100--Sobic002G216100 Sobic007G176100--Sobic004G139300 Sobic006G197100 Sobic006G197100 Sobic007G176100--Sobic006G197100 Sobic002G216100--Sobic004G139300 Sobic002G404100 Sobic002G404100 Sobic002G216100--Sobic002G404100 Sobic002G216100--Sobic007G178900 Sobic010G113100 Sobic010G113100 Sobic002G216100--Sobic010G113100 Sobic002G216100--Sobic007G176000 Sobic002G216100--Sobic002G185800 Sobic001G360500 Sobic001G360500 Sobic002G216100--Sobic001G360500 Sobic002G216100--Sobic005G046700 Sobic002G042200 Sobic002G042200 Sobic002G216100--Sobic002G042200 Sobic008G055100 Sobic008G055100 Sobic010G096400--Sobic008G055100 Sobic010G096400--Sobic004G139300 Sobic002G365550 Sobic002G365550 Sobic010G096400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic010G096400--Sobic002G365801 Sobic009G088500 Sobic009G088500 Sobic010G096400--Sobic009G088500 Sobic010G096400--Sobic002G216100 Sobic010G096400--Sobic001G360500 Sobic002G368300 Sobic002G368300 Sobic010G096400--Sobic002G368300 Sobic010G096400--Sobic007G176000 Sobic002G185800--Sobic005G046700 Sobic002G185800--Sobic004G139300 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic002G185800--Sobic007G178900 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic002G185800--Sobic007G176000 Sobic004G139300--Sobic002G216100 Sobic004G139300--Sobic002G042200 Sobic002G001700 Sobic002G001700 Sobic004G139300--Sobic002G001700 Sobic004G139300--Sobic002G185800 Sobic004G139300--Sobic010G096400 Sobic004G139300--Sobic006G197100 Sobic004G139300--Sobic007G178900 Sobic004G139300--Sobic007G176000 Sobic003G351600 Sobic003G351600 Sobic004G139300--Sobic003G351600 Sobic008G034700--Sobic006G183900 Sobic007G109600 Sobic007G109600 Sobic008G034700--Sobic007G109600 Sobic002G365600 Sobic002G365600 Sobic008G034700--Sobic002G365600 Sobic008G034700--Sobic008G048400 Sobic003G269500 Sobic003G269500 Sobic008G034700--Sobic003G269500 Sobic005G041300 Sobic005G041300 Sobic008G034700--Sobic005G041300 Sobic009G073800 Sobic009G073800 Sobic008G034700--Sobic009G073800 Sobic004G126700 Sobic004G126700 Sobic008G034700--Sobic004G126700 Sobic002G365500 Sobic002G365500 Sobic008G034700--Sobic002G365500 Sobic007G176000--Sobic007G176100 Sobic007G176000--Sobic007G178900 Sobic007G176000--Sobic007G030501 Sobic007G176000--Sobic002G216100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic007G176000--Sobic002G185800 Sobic007G176000--Sobic004G139300 Sobic007G176000--Sobic008G055100 Sobic004G110700 Sobic004G110700 Sobic003G269600--Sobic004G110700 Sobic003G399600 Sobic003G399600 Sobic003G269600--Sobic003G399600 Sobic006G274933 Sobic006G274933 Sobic003G269600--Sobic006G274933 Sobic006G150100 Sobic006G150100 Sobic003G269600--Sobic006G150100 Sobic002G183700 Sobic002G183700 Sobic003G269600--Sobic002G183700 Sobic010G106500 Sobic010G106500 Sobic003G269600--Sobic010G106500 Sobic003G121100 Sobic003G121100 Sobic003G269600--Sobic003G121100 Sobic003G140700 Sobic003G140700 Sobic003G269600--Sobic003G140700 Sobic006G170600 Sobic006G170600 Sobic003G269600--Sobic006G170600 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic006G183900--Sobic007G109600 Sobic006G028400 Sobic006G028400 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic007G170300 Sobic007G170300 Sobic006G183900--Sobic007G170300 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500
Octagon: transcription factors


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