Gene annotation
Transcriptome id Sobic.010G102500.1
Synonym Sb10g008930
Functional annotation expressed protein
UniProt C5Z7W5
Pfam -
Panther DB PTHR35547 PTHR35547:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g13940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G138300 expressed protein -
2 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
3 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
5 Sobic.002G215300 expressed protein -
6 Sobic.005G215601 - -
7 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
8 Sobic.001G481500 - -
9 Sobic.001G354200 O-methyltransferase, putative, expressed -
10 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
11 Sobic.010G275100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
12 Sobic.009G041000 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
13 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
14 Sobic.010G031300 auxin-induced protein 5NG4, putative, expressed -
15 Sobic.009G123400 - -
16 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
17 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
18 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
19 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
20 Sobic.010G015300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G102500 Sobic010G102500 Sobic003G138300 Sobic003G138300 Sobic010G102500--Sobic003G138300 Sobic006G032700 Sobic006G032700 Sobic010G102500--Sobic006G032700 Sobic004G236100 Sobic004G236100 Sobic010G102500--Sobic004G236100 Sobic010G031100 Sobic010G031100 Sobic010G102500--Sobic010G031100 Sobic002G215300 Sobic002G215300 Sobic010G102500--Sobic002G215300 Sobic005G215601 Sobic005G215601 Sobic010G102500--Sobic005G215601 Sobic001G309600 Sobic001G309600 Sobic010G102500--Sobic001G309600 Sobic001G481500 Sobic001G481500 Sobic010G102500--Sobic001G481500 Sobic001G354200 Sobic001G354200 Sobic010G102500--Sobic001G354200 Sobic003G138300--Sobic006G032700 Sobic003G138300--Sobic001G309600 Sobic003G138300--Sobic002G215300 Sobic003G367200 Sobic003G367200 Sobic003G138300--Sobic003G367200 Sobic010G032100 Sobic010G032100 Sobic003G138300--Sobic010G032100 Sobic001G397200 Sobic001G397200 Sobic003G138300--Sobic001G397200 Sobic003G138300--Sobic001G481500 Sobic003G138300--Sobic010G031100 Sobic001G149800 Sobic001G149800 Sobic003G138300--Sobic001G149800 Sobic006G032700--Sobic003G138300 Sobic006G032700--Sobic010G032100 Sobic006G032700--Sobic001G309600 Sobic006G032700--Sobic001G397200 Sobic006G032700--Sobic001G481500 Sobic006G032700--Sobic001G354200 Sobic006G032700--Sobic010G031100 Sobic006G032700--Sobic002G215300 Sobic006G032700--Sobic001G149800 Sobic004G336500 Sobic004G336500 Sobic004G236100--Sobic004G336500 Sobic009G069800 Sobic009G069800 Sobic004G236100--Sobic009G069800 Sobic007G008100 Sobic007G008100 Sobic004G236100--Sobic007G008100 Sobic001G054500 Sobic001G054500 Sobic004G236100--Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic004G236100--Sobic002G042000 Sobic001G525200 Sobic001G525200 Sobic004G236100--Sobic001G525200 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic004G236100--Sobic001G354200 Sobic010G031100--Sobic010G032100 Sobic006G230800 Sobic006G230800 Sobic010G031100--Sobic006G230800 Sobic010G031100--Sobic001G149800 Sobic010G031100--Sobic002G215300 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic002G215300--Sobic010G031100 Sobic002G215300--Sobic003G138300 Sobic002G215300--Sobic001G309600 Sobic002G215300--Sobic001G149800 Sobic002G215300--Sobic010G032100 Sobic002G215300--Sobic006G032700 Sobic002G215300--Sobic001G481500 Sobic010G031300 Sobic010G031300 Sobic002G215300--Sobic010G031300 Sobic003G394400 Sobic003G394400 Sobic002G215300--Sobic003G394400 Sobic010G032000 Sobic010G032000 Sobic005G215601--Sobic010G032000 Sobic004G340200 Sobic004G340200 Sobic005G215601--Sobic004G340200 Sobic009G123400 Sobic009G123400 Sobic005G215601--Sobic009G123400 Sobic005G215601--Sobic010G031100 Sobic001G129700 Sobic001G129700 Sobic005G215601--Sobic001G129700 Sobic004G210700 Sobic004G210700 Sobic005G215601--Sobic004G210700 Sobic005G215601--Sobic001G354200 Sobic007G066900 Sobic007G066900 Sobic005G215601--Sobic007G066900 Sobic005G215601--Sobic006G032700 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic003G086600 Sobic003G086600 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic001G481500--Sobic001G309600 Sobic001G481500--Sobic006G032700 Sobic001G481500--Sobic001G397200 Sobic001G481500--Sobic010G032100 Sobic001G481500--Sobic001G149800 Sobic001G481500--Sobic003G138300 Sobic001G481500--Sobic003G086600 Sobic001G481500--Sobic002G215300 Sobic002G068600 Sobic002G068600 Sobic001G481500--Sobic002G068600 Sobic001G354200--Sobic006G032700 Sobic001G354200--Sobic001G397200 Sobic010G275100 Sobic010G275100 Sobic001G354200--Sobic010G275100 Sobic001G354200--Sobic010G032100 Sobic001G354200--Sobic003G138300 Sobic001G354200--Sobic001G481500 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic001G354200--Sobic009G229000
Octagon: transcription factors


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